Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
PRIM2P49643 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRIM2P49643 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PRIM2P49643 AL353803.4-201ENST00000565882 1934 ntBASIC20.96■□□□□ 0.95
PRIM2P49643 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.96■□□□□ 0.95
PRIM2P49643 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRIM2P49643 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRIM2P49643 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRIM2P49643 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRIM2P49643 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRIM2P49643 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRIM2P49643 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.95■□□□□ 0.94
PRIM2P49643 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRIM2P49643 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRIM2P49643 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRIM2P49643 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRIM2P49643 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
PRIM2P49643 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 TSPY9P-201ENST00000440215 945 ntBASIC20.94■□□□□ 0.94
PRIM2P49643 TSPY11P-201ENST00000442607 1045 ntBASIC20.94■□□□□ 0.94
PRIM2P49643 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 AC010997.5-201ENST00000609182 354 ntBASIC20.94■□□□□ 0.94
PRIM2P49643 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PRIM2P49643 AL035685.1-201ENST00000636663 812 ntBASIC20.94■□□□□ 0.94
PRIM2P49643 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PRIM2P49643 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.94■□□□□ 0.94
PRIM2P49643 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRIM2P49643 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
PRIM2P49643 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRIM2P49643 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.93■□□□□ 0.94
PRIM2P49643 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRIM2P49643 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.93■□□□□ 0.94
PRIM2P49643 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRIM2P49643 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRIM2P49643 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRIM2P49643 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRIM2P49643 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
PRIM2P49643 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRIM2P49643 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PRIM2P49643 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRIM2P49643 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.91■□□□□ 0.94
PRIM2P49643 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 LINC00526-201ENST00000581067 1875 ntBASIC20.91■□□□□ 0.94
PRIM2P49643 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.91■□□□□ 0.94
PRIM2P49643 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRIM2P49643 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.91■□□□□ 0.94
PRIM2P49643 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.9■□□□□ 0.94
PRIM2P49643 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.9■□□□□ 0.94
PRIM2P49643 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.9■□□□□ 0.94
PRIM2P49643 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.9■□□□□ 0.94
PRIM2P49643 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.9■□□□□ 0.94
PRIM2P49643 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRIM2P49643 ECEL1P1-201ENST00000373592 1742 ntBASIC20.9■□□□□ 0.94
PRIM2P49643 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRIM2P49643 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRIM2P49643 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRIM2P49643 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRIM2P49643 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PRIM2P49643 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms