Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
CENPAP49450 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.93■□□□□ 0.78
CENPAP49450 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.93■□□□□ 0.78
CENPAP49450 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPAP49450 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CENPAP49450 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPAP49450 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPAP49450 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CENPAP49450 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPAP49450 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.92■□□□□ 0.78
CENPAP49450 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
CENPAP49450 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.92■□□□□ 0.78
CENPAP49450 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CENPAP49450 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CENPAP49450 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPAP49450 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.92■□□□□ 0.78
CENPAP49450 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.91■□□□□ 0.78
CENPAP49450 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CENPAP49450 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPAP49450 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.91■□□□□ 0.78
CENPAP49450 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CENPAP49450 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.91■□□□□ 0.78
CENPAP49450 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.9■□□□□ 0.78
CENPAP49450 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.9■□□□□ 0.78
CENPAP49450 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.9■□□□□ 0.78
CENPAP49450 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 AL353803.4-201ENST00000565882 1934 ntBASIC19.9■□□□□ 0.78
CENPAP49450 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPAP49450 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CENPAP49450 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CENPAP49450 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.89■□□□□ 0.77
CENPAP49450 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.89■□□□□ 0.77
CENPAP49450 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CENPAP49450 KRT125P-201ENST00000546827 989 ntBASIC19.89■□□□□ 0.77
CENPAP49450 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CENPAP49450 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CENPAP49450 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.88■□□□□ 0.77
CENPAP49450 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 AC005703.6-201ENST00000623265 1329 ntBASIC19.88■□□□□ 0.77
CENPAP49450 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.88■□□□□ 0.77
CENPAP49450 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CENPAP49450 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPAP49450 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CENPAP49450 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CENPAP49450 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 AC021242.3-201ENST00000607598 1377 ntBASIC19.87■□□□□ 0.77
CENPAP49450 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CENPAP49450 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.87■□□□□ 0.77
CENPAP49450 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CENPAP49450 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.87■□□□□ 0.77
CENPAP49450 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPAP49450 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CENPAP49450 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.86■□□□□ 0.77
CENPAP49450 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CENPAP49450 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms