Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.4■□□□□ 0.7
CX3CR1P49238 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.4■□□□□ 0.7
CX3CR1P49238 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CX3CR1P49238 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CX3CR1P49238 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CX3CR1P49238 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CX3CR1P49238 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.4■□□□□ 0.7
CX3CR1P49238 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CX3CR1P49238 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
CX3CR1P49238 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CX3CR1P49238 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CX3CR1P49238 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CX3CR1P49238 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CX3CR1P49238 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CX3CR1P49238 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CX3CR1P49238 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.39■□□□□ 0.69
CX3CR1P49238 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
CX3CR1P49238 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.39■□□□□ 0.69
CX3CR1P49238 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.39■□□□□ 0.69
CX3CR1P49238 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CX3CR1P49238 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CX3CR1P49238 ESRRAP2-201ENST00000418437 1549 ntBASIC19.39■□□□□ 0.69
CX3CR1P49238 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.39■□□□□ 0.69
CX3CR1P49238 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CX3CR1P49238 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.39■□□□□ 0.69
CX3CR1P49238 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.38■□□□□ 0.69
CX3CR1P49238 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.38■□□□□ 0.69
CX3CR1P49238 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
CX3CR1P49238 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CX3CR1P49238 FP325331.1-202ENST00000623531 1380 ntBASIC19.38■□□□□ 0.69
CX3CR1P49238 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CX3CR1P49238 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.37■□□□□ 0.69
CX3CR1P49238 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CX3CR1P49238 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CX3CR1P49238 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CX3CR1P49238 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CX3CR1P49238 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.36■□□□□ 0.69
CX3CR1P49238 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 EP400NL-214ENST00000641289 2402 ntBASIC19.36■□□□□ 0.69
CX3CR1P49238 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.36■□□□□ 0.69
CX3CR1P49238 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CX3CR1P49238 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
CX3CR1P49238 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CX3CR1P49238 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CX3CR1P49238 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.35■□□□□ 0.69
CX3CR1P49238 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.35■□□□□ 0.69
CX3CR1P49238 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CX3CR1P49238 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.35■□□□□ 0.69
CX3CR1P49238 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.35■□□□□ 0.69
CX3CR1P49238 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CX3CR1P49238 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CX3CR1P49238 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CX3CR1P49238 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CX3CR1P49238 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CX3CR1P49238 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CX3CR1P49238 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CX3CR1P49238 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CX3CR1P49238 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CX3CR1P49238 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CX3CR1P49238 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CX3CR1P49238 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CX3CR1P49238 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CX3CR1P49238 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms