Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 OCT1YKL134C 2319 nt3.62□□□□□ -1.83
LSM1P47017 BOI2YER114C 3123 nt3.62□□□□□ -1.83
LSM1P47017 EKI1YDR147W 1605 nt3.62□□□□□ -1.83
LSM1P47017 YGL140CYGL140C 3660 nt3.62□□□□□ -1.83
LSM1P47017 ACE2YLR131C 2313 nt3.61□□□□□ -1.83
LSM1P47017 YCR050CYCR050C 309 nt3.61□□□□□ -1.83
LSM1P47017 YGL108CYGL108C 423 nt3.61□□□□□ -1.83
LSM1P47017 AIR1YIL079C 1083 nt3.61□□□□□ -1.83
LSM1P47017 SEC72YLR292C 582 nt3.61□□□□□ -1.83
LSM1P47017 YML053CYML053C 639 nt3.61□□□□□ -1.83
LSM1P47017 SNF8YPL002C 702 nt3.61□□□□□ -1.83
LSM1P47017 SSO1YPL232W 873 nt3.61□□□□□ -1.83
LSM1P47017 UBA3YPR066W 900 nt3.61□□□□□ -1.83
LSM1P47017 TMN2YDR107C 2019 nt3.61□□□□□ -1.83
LSM1P47017 MDL1YLR188W 2088 nt3.61□□□□□ -1.83
LSM1P47017 ALG9YNL219C 1668 nt3.6□□□□□ -1.83
LSM1P47017 ELO2YCR034W 1044 nt3.6□□□□□ -1.83
LSM1P47017 AAD6YFL056C 639 nt3.6□□□□□ -1.83
LSM1P47017 FMP48YGR052W 1110 nt3.6□□□□□ -1.83
LSM1P47017 RPS0BYLR048W 759 nt3.6□□□□□ -1.83
LSM1P47017 NSP1YJL041W 2472 nt3.6□□□□□ -1.83
LSM1P47017 KRI1YNL308C 1776 nt3.59□□□□□ -1.83
LSM1P47017 SAS10YDL153C 1833 nt3.59□□□□□ -1.83
LSM1P47017 HEF3YNL014W 3135 nt3.59□□□□□ -1.83
LSM1P47017 POL1YNL102W 4407 nt3.59□□□□□ -1.83
LSM1P47017 VAC17YCL063W 1272 nt3.59□□□□□ -1.83
LSM1P47017 CIA2YHR122W 696 nt3.59□□□□□ -1.83
LSM1P47017 FMP46YKR049C 402 nt3.59□□□□□ -1.83
LSM1P47017 ATG21YPL100W 1491 nt3.59□□□□□ -1.84
LSM1P47017 YLR345WYLR345W 1530 nt3.59□□□□□ -1.84
LSM1P47017 BUD27YFL023W 2391 nt3.59□□□□□ -1.84
LSM1P47017 YOR022CYOR022C 2148 nt3.58□□□□□ -1.84
LSM1P47017 BRE4YDL231C 3378 nt3.58□□□□□ -1.84
LSM1P47017 YER134CYER134C 537 nt3.58□□□□□ -1.84
LSM1P47017 EFB1YAL003W 621 nt3.58□□□□□ -1.84
LSM1P47017 HEK2YBL032W 1146 nt3.58□□□□□ -1.84
LSM1P47017 VPS68YOL129W 555 nt3.58□□□□□ -1.84
LSM1P47017 ECM23YPL021W 564 nt3.58□□□□□ -1.84
LSM1P47017 ELC1YPL046C 300 nt3.58□□□□□ -1.84
LSM1P47017 HSP26YBR072W 645 nt3.58□□□□□ -1.84
LSM1P47017 VPS69YPR087W 321 nt3.58□□□□□ -1.84
LSM1P47017 RNT1YMR239C 1416 nt3.58□□□□□ -1.84
LSM1P47017 TAF10YDR167W 621 nt3.57□□□□□ -1.84
LSM1P47017 YDR464C-AYDR464C-A 189 nt3.57□□□□□ -1.84
LSM1P47017 ROK1YGL171W 1695 nt3.57□□□□□ -1.84
LSM1P47017 FRA2YGL220W 363 nt3.57□□□□□ -1.84
LSM1P47017 YIL152WYIL152W 708 nt3.57□□□□□ -1.84
LSM1P47017 YJR030CYJR030C 2238 nt3.57□□□□□ -1.84
LSM1P47017 LAP2YNL045W 2016 nt3.57□□□□□ -1.84
LSM1P47017 PCL1YNL289W 840 nt3.57□□□□□ -1.84
LSM1P47017 MNT4YNR059W 1743 nt3.57□□□□□ -1.84
LSM1P47017 PHM7YOL084W 2976 nt3.57□□□□□ -1.84
LSM1P47017 RGS2YOR107W 930 nt3.57□□□□□ -1.84
LSM1P47017 HEM15YOR176W 1182 nt3.57□□□□□ -1.84
LSM1P47017 YPL088WYPL088W 1029 nt3.57□□□□□ -1.84
LSM1P47017 SPT16YGL207W 3108 nt3.57□□□□□ -1.84
LSM1P47017 SPC105YGL093W 2754 nt3.57□□□□□ -1.84
LSM1P47017 REB1YBR049C 2433 nt3.56□□□□□ -1.84
LSM1P47017 GZF3YJL110C 1656 nt3.56□□□□□ -1.84
LSM1P47017 GCN5YGR252W 1320 nt3.56□□□□□ -1.84
LSM1P47017 TRM11YOL124C 1302 nt3.56□□□□□ -1.84
LSM1P47017 PTC1YDL006W 846 nt3.56□□□□□ -1.84
LSM1P47017 NOP6YDL213C 678 nt3.56□□□□□ -1.84
LSM1P47017 SPR6YER115C 576 nt3.56□□□□□ -1.84
LSM1P47017 SPT4YGR063C 309 nt3.56□□□□□ -1.84
LSM1P47017 REH1YLR387C 1299 nt3.56□□□□□ -1.84
LSM1P47017 NME1NME1 340 nt3.56□□□□□ -1.84
LSM1P47017 PHO87YCR037C 2772 nt3.56□□□□□ -1.84
LSM1P47017 ZDS1YMR273C 2748 nt3.56□□□□□ -1.84
LSM1P47017 YNR065CYNR065C 3351 nt3.55□□□□□ -1.84
LSM1P47017 SWI1YPL016W 3945 nt3.55□□□□□ -1.84
LSM1P47017 ELM1YKL048C 1923 nt3.55□□□□□ -1.84
LSM1P47017 SPC19YDR201W 498 nt3.55□□□□□ -1.84
LSM1P47017 MIG3YER028C 1185 nt3.55□□□□□ -1.84
LSM1P47017 YER034WYER034W 558 nt3.55□□□□□ -1.84
LSM1P47017 YHR145CYHR145C 357 nt3.55□□□□□ -1.84
LSM1P47017 RPB3YIL021W 957 nt3.55□□□□□ -1.84
LSM1P47017 YLR154W-BYLR154W-B 165 nt3.55□□□□□ -1.84
LSM1P47017 RRP36YOR287C 903 nt3.55□□□□□ -1.84
LSM1P47017 YBR056W-AYBR056W-A 201 nt3.55□□□□□ -1.84
LSM1P47017 GAC1YOR178C 2382 nt3.55□□□□□ -1.84
LSM1P47017 PMT6YGR199W 2280 nt3.55□□□□□ -1.84
LSM1P47017 DIT2YDR402C 1470 nt3.54□□□□□ -1.84
LSM1P47017 SOF1YLL011W 1470 nt3.54□□□□□ -1.84
LSM1P47017 RTS1YOR014W 2274 nt3.54□□□□□ -1.84
LSM1P47017 RPC53YDL150W 1269 nt3.54□□□□□ -1.84
LSM1P47017 YHL026CYHL026C 948 nt3.54□□□□□ -1.84
LSM1P47017 YML031C-AYML031C-A 336 nt3.54□□□□□ -1.84
LSM1P47017 AST1YBL069W 1290 nt3.54□□□□□ -1.84
LSM1P47017 APP1YNL094W 1764 nt3.53□□□□□ -1.84
LSM1P47017 MTC4YBR255W 2085 nt3.53□□□□□ -1.84
LSM1P47017 JAC1YGL018C 555 nt3.53□□□□□ -1.84
LSM1P47017 YGR011WYGR011W 327 nt3.53□□□□□ -1.84
LSM1P47017 RSM25YIL093C 795 nt3.53□□□□□ -1.84
LSM1P47017 SOD1YJR104C 465 nt3.53□□□□□ -1.84
LSM1P47017 RPC19YNL113W 429 nt3.53□□□□□ -1.84
LSM1P47017 RRP40YOL142W 723 nt3.53□□□□□ -1.84
LSM1P47017 DPH6YLR143W 2058 nt3.53□□□□□ -1.84
LSM1P47017 CLB4YLR210W 1383 nt3.52□□□□□ -1.85
LSM1P47017 SUC2YIL162W 1599 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms