Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XCR1P46094 AC024257.2-201ENST00000549699 147 ntBASIC21.12■□□□□ 0.97
XCR1P46094 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.12■□□□□ 0.97
XCR1P46094 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.12■□□□□ 0.97
XCR1P46094 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
XCR1P46094 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.12■□□□□ 0.97
XCR1P46094 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XCR1P46094 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
XCR1P46094 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.11■□□□□ 0.97
XCR1P46094 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
XCR1P46094 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.11■□□□□ 0.97
XCR1P46094 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.11■□□□□ 0.97
XCR1P46094 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.11■□□□□ 0.97
XCR1P46094 AC106739.1-201ENST00000617035 715 ntBASIC21.11■□□□□ 0.97
XCR1P46094 AL117328.2-201ENST00000624617 1940 ntBASIC21.11■□□□□ 0.97
XCR1P46094 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
XCR1P46094 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
XCR1P46094 FP325331.1-202ENST00000623531 1380 ntBASIC21.1■□□□□ 0.97
XCR1P46094 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
XCR1P46094 MIR638-201ENST00000385237 100 ntBASIC21.1■□□□□ 0.97
XCR1P46094 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.1■□□□□ 0.97
XCR1P46094 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.1■□□□□ 0.97
XCR1P46094 AC079630.1-202ENST00000618127 1840 ntBASIC21.1■□□□□ 0.97
XCR1P46094 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
XCR1P46094 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
XCR1P46094 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XCR1P46094 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XCR1P46094 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.09■□□□□ 0.97
XCR1P46094 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XCR1P46094 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.09■□□□□ 0.97
XCR1P46094 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.09■□□□□ 0.97
XCR1P46094 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XCR1P46094 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XCR1P46094 LINC01529-204ENST00000636474 1715 ntBASIC21.09■□□□□ 0.97
XCR1P46094 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XCR1P46094 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
XCR1P46094 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.08■□□□□ 0.97
XCR1P46094 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XCR1P46094 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XCR1P46094 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XCR1P46094 MIR3181-201ENST00000578512 73 ntBASIC21.08■□□□□ 0.97
XCR1P46094 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.08■□□□□ 0.97
XCR1P46094 AL138724.1-201ENST00000606771 1088 ntBASIC21.08■□□□□ 0.97
XCR1P46094 pRNA.6-201ENST00000610482 90 ntBASIC21.08■□□□□ 0.97
XCR1P46094 pRNA.5-201ENST00000612139 90 ntBASIC21.08■□□□□ 0.97
XCR1P46094 pRNA.11-201ENST00000618423 90 ntBASIC21.08■□□□□ 0.97
XCR1P46094 pRNA.13-201ENST00000619112 90 ntBASIC21.08■□□□□ 0.97
XCR1P46094 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
XCR1P46094 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
XCR1P46094 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
XCR1P46094 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
XCR1P46094 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
XCR1P46094 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.07■□□□□ 0.96
XCR1P46094 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
XCR1P46094 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
XCR1P46094 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.07■□□□□ 0.96
XCR1P46094 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.07■□□□□ 0.96
XCR1P46094 AC011298.3-201ENST00000615796 283 ntBASIC21.07■□□□□ 0.96
XCR1P46094 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.07■□□□□ 0.96
XCR1P46094 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
XCR1P46094 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
XCR1P46094 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
XCR1P46094 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
XCR1P46094 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.06■□□□□ 0.96
XCR1P46094 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.06■□□□□ 0.96
XCR1P46094 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.06■□□□□ 0.96
XCR1P46094 AC133561.4-201ENST00000566112 224 ntBASIC21.06■□□□□ 0.96
XCR1P46094 DUX4L4-201ENST00000566884 1269 ntBASIC21.06■□□□□ 0.96
XCR1P46094 AC233723.2-201ENST00000623798 2106 ntBASIC21.06■□□□□ 0.96
XCR1P46094 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.06■□□□□ 0.96
XCR1P46094 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.06■□□□□ 0.96
XCR1P46094 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
XCR1P46094 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XCR1P46094 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XCR1P46094 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
XCR1P46094 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XCR1P46094 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
XCR1P46094 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.05■□□□□ 0.96
XCR1P46094 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
XCR1P46094 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
XCR1P46094 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.05■□□□□ 0.96
XCR1P46094 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
XCR1P46094 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.05■□□□□ 0.96
XCR1P46094 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.04■□□□□ 0.96
XCR1P46094 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
XCR1P46094 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms