Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CXCL5P42830 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CXCL5P42830 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CXCL5P42830 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL5P42830 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
CXCL5P42830 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CXCL5P42830 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CXCL5P42830 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CXCL5P42830 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL5P42830 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCL5P42830 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL5P42830 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL5P42830 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL5P42830 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL5P42830 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 MTX2-204ENST00000443241 799 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL5P42830 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.84□□□□□ -0.03
CXCL5P42830 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL5P42830 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL5P42830 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL5P42830 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL5P42830 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL5P42830 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL5P42830 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.83□□□□□ -0.03
CXCL5P42830 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL5P42830 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CXCL5P42830 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.83□□□□□ -0.04
CXCL5P42830 AC139795.1-202ENST00000500444 432 ntBASIC14.83□□□□□ -0.04
CXCL5P42830 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CXCL5P42830 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL5P42830 AC092053.2-201ENST00000640557 1818 ntBASIC14.82□□□□□ -0.04
CXCL5P42830 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL5P42830 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL5P42830 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL5P42830 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.82□□□□□ -0.04
CXCL5P42830 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL5P42830 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL5P42830 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CXCL5P42830 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL5P42830 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL5P42830 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL5P42830 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL5P42830 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL5P42830 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL5P42830 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL5P42830 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL5P42830 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms