Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 SPT10YJL127C 1923 nt4.62□□□□□ -1.67
RTR1P40084 TDA11YHR159W 1515 nt4.62□□□□□ -1.67
RTR1P40084 SWH1YAR042W 3567 nt4.61□□□□□ -1.67
RTR1P40084 SAS10YDL153C 1833 nt4.61□□□□□ -1.67
RTR1P40084 SLA1YBL007C 3735 nt4.61□□□□□ -1.67
RTR1P40084 SAC1YKL212W 1872 nt4.61□□□□□ -1.67
RTR1P40084 YGR016WYGR016W 573 nt4.61□□□□□ -1.67
RTR1P40084 RIB4YOL143C 510 nt4.61□□□□□ -1.67
RTR1P40084 LDB17YDL146W 1476 nt4.61□□□□□ -1.67
RTR1P40084 AAD3YCR107W 1092 nt4.6□□□□□ -1.67
RTR1P40084 CBP3YPL215W 1008 nt4.6□□□□□ -1.67
RTR1P40084 SBE2YDR351W 2595 nt4.6□□□□□ -1.67
RTR1P40084 PRP40YKL012W 1752 nt4.6□□□□□ -1.67
RTR1P40084 PPZ1YML016C 2079 nt4.6□□□□□ -1.67
RTR1P40084 CHD1YER164W 4407 nt4.59□□□□□ -1.67
RTR1P40084 MRH4YGL064C 1686 nt4.59□□□□□ -1.67
RTR1P40084 ORC6YHR118C 1308 nt4.59□□□□□ -1.67
RTR1P40084 FMP33YJL161W 543 nt4.59□□□□□ -1.67
RTR1P40084 AIM26YKL037W 357 nt4.59□□□□□ -1.67
RTR1P40084 ADD66YKL206C 804 nt4.59□□□□□ -1.67
RTR1P40084 YPL114WYPL114W 420 nt4.59□□□□□ -1.67
RTR1P40084 ECM8YBR076W 1065 nt4.59□□□□□ -1.67
RTR1P40084 DER1YBR201W 636 nt4.59□□□□□ -1.67
RTR1P40084 SEG2YKL105C 3399 nt4.59□□□□□ -1.68
RTR1P40084 PDR5YOR153W 4536 nt4.58□□□□□ -1.68
RTR1P40084 CDC10YCR002C 969 nt4.58□□□□□ -1.68
RTR1P40084 YDL124WYDL124W 939 nt4.58□□□□□ -1.68
RTR1P40084 FOL2YGR267C 732 nt4.58□□□□□ -1.68
RTR1P40084 YMR082CYMR082C 357 nt4.58□□□□□ -1.68
RTR1P40084 SKM1YOL113W 1968 nt4.58□□□□□ -1.68
RTR1P40084 JEN1YKL217W 1851 nt4.58□□□□□ -1.68
RTR1P40084 HMG1YML075C 3165 nt4.57□□□□□ -1.68
RTR1P40084 RAD1YPL022W 3303 nt4.57□□□□□ -1.68
RTR1P40084 TRX3YCR083W 384 nt4.57□□□□□ -1.68
RTR1P40084 FAD1YDL045C 921 nt4.57□□□□□ -1.68
RTR1P40084 NVJ1YHR195W 966 nt4.57□□□□□ -1.68
RTR1P40084 MET16YPR167C 786 nt4.57□□□□□ -1.68
RTR1P40084 SRO7YPR032W 3102 nt4.57□□□□□ -1.68
RTR1P40084 DIT1YDR403W 1611 nt4.57□□□□□ -1.68
RTR1P40084 UBX5YDR330W 1503 nt4.56□□□□□ -1.68
RTR1P40084 MSD1YPL104W 1977 nt4.56□□□□□ -1.68
RTR1P40084 RRN6YBL014C 2685 nt4.56□□□□□ -1.68
RTR1P40084 TDA1YMR291W 1761 nt4.56□□□□□ -1.68
RTR1P40084 AGA1YNR044W 2178 nt4.56□□□□□ -1.68
RTR1P40084 ARP10YDR106W 855 nt4.56□□□□□ -1.68
RTR1P40084 YDR161WYDR161W 1164 nt4.56□□□□□ -1.68
RTR1P40084 YGL063C-AYGL063C-A 150 nt4.56□□□□□ -1.68
RTR1P40084 GVP36YIL041W 981 nt4.56□□□□□ -1.68
RTR1P40084 OSW5YMR148W 447 nt4.56□□□□□ -1.68
RTR1P40084 CTR1YPR124W 1221 nt4.56□□□□□ -1.68
RTR1P40084 snR3snR3 194 nt4.56□□□□□ -1.68
RTR1P40084 RIM21YNL294C 1602 nt4.55□□□□□ -1.68
RTR1P40084 YGR161W-CYGR161W-C 279 nt4.55□□□□□ -1.68
RTR1P40084 MRS3YJL133W 945 nt4.55□□□□□ -1.68
RTR1P40084 YPT7YML001W 627 nt4.55□□□□□ -1.68
RTR1P40084 VPS53YJL029C 2469 nt4.55□□□□□ -1.68
RTR1P40084 MEF2YJL102W 2460 nt4.55□□□□□ -1.68
RTR1P40084 APE2YKL157W 2859 nt4.55□□□□□ -1.68
RTR1P40084 SMP1YBR182C 1359 nt4.54□□□□□ -1.68
RTR1P40084 ZDS1YMR273C 2748 nt4.54□□□□□ -1.68
RTR1P40084 ECM22YLR228C 2445 nt4.54□□□□□ -1.68
RTR1P40084 EAF5YEL018W 840 nt4.54□□□□□ -1.68
RTR1P40084 SEC53YFL045C 765 nt4.54□□□□□ -1.68
RTR1P40084 IBA57YJR122W 1494 nt4.54□□□□□ -1.68
RTR1P40084 GPI18YBR004C 1302 nt4.53□□□□□ -1.68
RTR1P40084 SPR28YDR218C 1272 nt4.53□□□□□ -1.68
RTR1P40084 BNS1YGR230W 414 nt4.53□□□□□ -1.68
RTR1P40084 AUR1YKL004W 1206 nt4.53□□□□□ -1.68
RTR1P40084 SWP1YMR149W 861 nt4.53□□□□□ -1.68
RTR1P40084 CDC14YFR028C 1656 nt4.53□□□□□ -1.68
RTR1P40084 BSC1YDL037C 987 nt4.52□□□□□ -1.69
RTR1P40084 YGL074CYGL074C 327 nt4.52□□□□□ -1.69
RTR1P40084 DAM1YGR113W 1032 nt4.52□□□□□ -1.69
RTR1P40084 MAD2YJL030W 591 nt4.52□□□□□ -1.69
RTR1P40084 TMA19YKL056C 504 nt4.52□□□□□ -1.69
RTR1P40084 CUS2YNL286W 858 nt4.52□□□□□ -1.69
RTR1P40084 GPI13YLL031C 3054 nt4.52□□□□□ -1.69
RTR1P40084 TRS120YDR407C 3870 nt4.52□□□□□ -1.69
RTR1P40084 BUD27YFL023W 2391 nt4.51□□□□□ -1.69
RTR1P40084 AVT7YIL088C 1473 nt4.51□□□□□ -1.69
RTR1P40084 MOH1YBL049W 417 nt4.51□□□□□ -1.69
RTR1P40084 IKS1YJL057C 2004 nt4.51□□□□□ -1.69
RTR1P40084 TRS85YDR108W 2097 nt4.5□□□□□ -1.69
RTR1P40084 MOT2YER068W 1764 nt4.5□□□□□ -1.69
RTR1P40084 KIN3YAR018C 1308 nt4.5□□□□□ -1.69
RTR1P40084 MTC3YGL226W 372 nt4.5□□□□□ -1.69
RTR1P40084 YMR086C-AYMR086C-A 339 nt4.5□□□□□ -1.69
RTR1P40084 RPS9BYBR189W 588 nt4.5□□□□□ -1.69
RTR1P40084 LAP2YNL045W 2016 nt4.5□□□□□ -1.69
RTR1P40084 GCN5YGR252W 1320 nt4.49□□□□□ -1.69
RTR1P40084 ELM1YKL048C 1923 nt4.49□□□□□ -1.69
RTR1P40084 MBR1YKL093W 1020 nt4.49□□□□□ -1.69
RTR1P40084 FDH1YOR388C 1131 nt4.49□□□□□ -1.69
RTR1P40084 ULS1YOR191W 4860 nt4.49□□□□□ -1.69
RTR1P40084 MRS2YOR334W 1413 nt4.48□□□□□ -1.69
RTR1P40084 IXR1YKL032C 1794 nt4.48□□□□□ -1.69
RTR1P40084 YDR391CYDR391C 699 nt4.48□□□□□ -1.69
RTR1P40084 OAF1YAL051W 3144 nt4.48□□□□□ -1.69
RTR1P40084 TIP20YGL145W 2106 nt4.48□□□□□ -1.69
RTR1P40084 OMS1YDR316W 1416 nt4.47□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms