Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKN1AP38936 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKN1AP38936 FP325331.1-202ENST00000623531 1380 ntBASIC18.9■□□□□ 0.62
CDKN1AP38936 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKN1AP38936 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKN1AP38936 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDKN1AP38936 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.9■□□□□ 0.62
CDKN1AP38936 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CDKN1AP38936 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDKN1AP38936 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CDKN1AP38936 AC144652.1-201ENST00000609974 1624 ntBASIC18.89■□□□□ 0.62
CDKN1AP38936 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 AC123595.1-201ENST00000440769 1046 ntBASIC18.89■□□□□ 0.61
CDKN1AP38936 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.89■□□□□ 0.61
CDKN1AP38936 AL137784.2-201ENST00000607332 1000 ntBASIC18.89■□□□□ 0.61
CDKN1AP38936 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CDKN1AP38936 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CDKN1AP38936 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN1AP38936 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.89■□□□□ 0.61
CDKN1AP38936 LINC01529-204ENST00000636474 1715 ntBASIC18.88■□□□□ 0.61
CDKN1AP38936 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CDKN1AP38936 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN1AP38936 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.88■□□□□ 0.61
CDKN1AP38936 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.88■□□□□ 0.61
CDKN1AP38936 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN1AP38936 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDKN1AP38936 AC090192.1-201ENST00000517740 490 ntBASIC18.88■□□□□ 0.61
CDKN1AP38936 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN1AP38936 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 RARRES2P11-201ENST00000635158 484 ntBASIC18.88■□□□□ 0.61
CDKN1AP38936 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKN1AP38936 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKN1AP38936 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN1AP38936 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CDKN1AP38936 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.87■□□□□ 0.61
CDKN1AP38936 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDKN1AP38936 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDKN1AP38936 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDKN1AP38936 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDKN1AP38936 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKN1AP38936 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 CCDC92B-201ENST00000575506 885 ntBASIC18.87■□□□□ 0.61
CDKN1AP38936 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKN1AP38936 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.87■□□□□ 0.61
CDKN1AP38936 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.87■□□□□ 0.61
CDKN1AP38936 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.87■□□□□ 0.61
CDKN1AP38936 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN1AP38936 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.86■□□□□ 0.61
CDKN1AP38936 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.86■□□□□ 0.61
CDKN1AP38936 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CDKN1AP38936 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN1AP38936 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN1AP38936 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.85■□□□□ 0.61
CDKN1AP38936 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN1AP38936 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN1AP38936 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKN1AP38936 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms