Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LMO1P25800 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.62■□□□□ 0.57
LMO1P25800 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LMO1P25800 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.62■□□□□ 0.57
LMO1P25800 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
LMO1P25800 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LMO1P25800 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.62■□□□□ 0.57
LMO1P25800 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LMO1P25800 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LMO1P25800 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.61■□□□□ 0.57
LMO1P25800 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LMO1P25800 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LMO1P25800 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 C17orf82-201ENST00000623772 1530 ntBASIC18.61■□□□□ 0.57
LMO1P25800 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LMO1P25800 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LMO1P25800 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
LMO1P25800 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMO1P25800 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.6■□□□□ 0.57
LMO1P25800 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LMO1P25800 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LMO1P25800 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LMO1P25800 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.6■□□□□ 0.57
LMO1P25800 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.6■□□□□ 0.57
LMO1P25800 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.6■□□□□ 0.57
LMO1P25800 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMO1P25800 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LMO1P25800 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
LMO1P25800 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LMO1P25800 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.59■□□□□ 0.57
LMO1P25800 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LMO1P25800 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LMO1P25800 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LMO1P25800 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
LMO1P25800 LINC00526-201ENST00000581067 1875 ntBASIC18.58■□□□□ 0.57
LMO1P25800 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LMO1P25800 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LMO1P25800 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LMO1P25800 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LMO1P25800 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LMO1P25800 GUSBP5-201ENST00000418136 578 ntBASIC18.58■□□□□ 0.56
LMO1P25800 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.58■□□□□ 0.56
LMO1P25800 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.58■□□□□ 0.56
LMO1P25800 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LMO1P25800 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO1P25800 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO1P25800 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.58■□□□□ 0.56
LMO1P25800 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LMO1P25800 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LMO1P25800 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LMO1P25800 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LMO1P25800 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LMO1P25800 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.57■□□□□ 0.56
LMO1P25800 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.57■□□□□ 0.56
LMO1P25800 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 KRT16P3-201ENST00000439127 1283 ntBASIC18.57■□□□□ 0.56
LMO1P25800 AC009086.3-201ENST00000623486 1008 ntBASIC18.57■□□□□ 0.56
LMO1P25800 AC127496.7-201ENST00000625110 1798 ntBASIC18.57■□□□□ 0.56
LMO1P25800 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LMO1P25800 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.57■□□□□ 0.56
LMO1P25800 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LMO1P25800 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.56■□□□□ 0.56
LMO1P25800 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.56■□□□□ 0.56
LMO1P25800 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO1P25800 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.56■□□□□ 0.56
LMO1P25800 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LMO1P25800 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.55■□□□□ 0.56
LMO1P25800 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LMO1P25800 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LMO1P25800 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.55■□□□□ 0.56
LMO1P25800 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.55■□□□□ 0.56
LMO1P25800 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.55■□□□□ 0.56
LMO1P25800 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms