Protein–RNA interactions for Protein: P21860

ERBB3, Receptor tyrosine-protein kinase erbB-3, humanhuman

Predictions only

Length 1,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3P21860 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
ERBB3P21860 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
ERBB3P21860 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ERBB3P21860 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
ERBB3P21860 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ERBB3P21860 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.64■■■□□ 2.34
ERBB3P21860 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.64■■■□□ 2.34
ERBB3P21860 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
ERBB3P21860 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
ERBB3P21860 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
ERBB3P21860 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
ERBB3P21860 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
ERBB3P21860 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ERBB3P21860 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.63■■■□□ 2.33
ERBB3P21860 AC080038.1-201ENST00000611274 1154 ntBASIC29.63■■■□□ 2.33
ERBB3P21860 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
ERBB3P21860 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ERBB3P21860 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ERBB3P21860 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ERBB3P21860 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ERBB3P21860 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC29.62■■■□□ 2.33
ERBB3P21860 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.62■■■□□ 2.33
ERBB3P21860 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.62■■■□□ 2.33
ERBB3P21860 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC29.62■■■□□ 2.33
ERBB3P21860 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.62■■■□□ 2.33
ERBB3P21860 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.61■■■□□ 2.33
ERBB3P21860 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ERBB3P21860 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
ERBB3P21860 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ERBB3P21860 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ERBB3P21860 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
ERBB3P21860 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC29.61■■■□□ 2.33
ERBB3P21860 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.61■■■□□ 2.33
ERBB3P21860 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.61■■■□□ 2.33
ERBB3P21860 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.61■■■□□ 2.33
ERBB3P21860 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ERBB3P21860 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.61■■■□□ 2.33
ERBB3P21860 AC138932.3-201ENST00000567634 1902 ntBASIC29.6■■■□□ 2.33
ERBB3P21860 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ERBB3P21860 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.6■■■□□ 2.33
ERBB3P21860 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.6■■■□□ 2.33
ERBB3P21860 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
ERBB3P21860 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC29.6■■■□□ 2.33
ERBB3P21860 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
ERBB3P21860 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
ERBB3P21860 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
ERBB3P21860 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
ERBB3P21860 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
ERBB3P21860 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ERBB3P21860 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ERBB3P21860 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
ERBB3P21860 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ERBB3P21860 CDCA4P2-201ENST00000441182 718 ntBASIC29.59■■■□□ 2.33
ERBB3P21860 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
ERBB3P21860 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.59■■■□□ 2.33
ERBB3P21860 AC073111.5-205ENST00000641717 521 ntBASIC29.59■■■□□ 2.33
ERBB3P21860 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
ERBB3P21860 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC29.58■■■□□ 2.33
ERBB3P21860 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.58■■■□□ 2.33
ERBB3P21860 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.58■■■□□ 2.33
ERBB3P21860 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ERBB3P21860 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.57■■■□□ 2.32
ERBB3P21860 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ERBB3P21860 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.57■■■□□ 2.32
ERBB3P21860 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ERBB3P21860 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.57■■■□□ 2.32
ERBB3P21860 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ERBB3P21860 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.57■■■□□ 2.32
ERBB3P21860 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ERBB3P21860 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC29.57■■■□□ 2.32
ERBB3P21860 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
ERBB3P21860 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
ERBB3P21860 AP004607.4-201ENST00000530158 1459 ntBASIC29.56■■■□□ 2.32
ERBB3P21860 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ERBB3P21860 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC29.56■■■□□ 2.32
ERBB3P21860 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ERBB3P21860 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.56■■■□□ 2.32
ERBB3P21860 AC137761.2-201ENST00000561729 223 ntBASIC29.56■■■□□ 2.32
ERBB3P21860 AC145350.3-201ENST00000569033 163 ntBASIC29.56■■■□□ 2.32
ERBB3P21860 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.56■■■□□ 2.32
ERBB3P21860 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ERBB3P21860 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.55■■■□□ 2.32
ERBB3P21860 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
ERBB3P21860 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ERBB3P21860 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.55■■■□□ 2.32
ERBB3P21860 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.55■■■□□ 2.32
ERBB3P21860 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ERBB3P21860 AC004854.2-201ENST00000608450 1441 ntBASIC29.55■■■□□ 2.32
ERBB3P21860 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.55■■■□□ 2.32
ERBB3P21860 AC142381.3-201ENST00000568208 1670 ntBASIC29.55■■■□□ 2.32
ERBB3P21860 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ERBB3P21860 GAS2L1P2-201ENST00000436355 1356 ntBASIC29.54■■■□□ 2.32
ERBB3P21860 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
ERBB3P21860 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ERBB3P21860 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ERBB3P21860 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ERBB3P21860 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.54■■■□□ 2.32
ERBB3P21860 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ERBB3P21860 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ERBB3P21860 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms