Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MSR1P21757 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.52■□□□□ 0.72
MSR1P21757 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.52■□□□□ 0.72
MSR1P21757 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.52■□□□□ 0.72
MSR1P21757 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MSR1P21757 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MSR1P21757 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MSR1P21757 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.51■□□□□ 0.71
MSR1P21757 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
MSR1P21757 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MSR1P21757 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MSR1P21757 AC233723.2-201ENST00000623798 2106 ntBASIC19.51■□□□□ 0.71
MSR1P21757 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MSR1P21757 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSR1P21757 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MSR1P21757 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
MSR1P21757 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.5■□□□□ 0.71
MSR1P21757 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.5■□□□□ 0.71
MSR1P21757 AC241377.3-202ENST00000626088 1088 ntBASIC19.5■□□□□ 0.71
MSR1P21757 AC241585.3-202ENST00000628937 1088 ntBASIC19.5■□□□□ 0.71
MSR1P21757 AC245100.8-202ENST00000629247 1058 ntBASIC19.5■□□□□ 0.71
MSR1P21757 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.5■□□□□ 0.71
MSR1P21757 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSR1P21757 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.49■□□□□ 0.71
MSR1P21757 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MSR1P21757 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.49■□□□□ 0.71
MSR1P21757 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSR1P21757 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.48■□□□□ 0.71
MSR1P21757 ESRRAP2-201ENST00000418437 1549 ntBASIC19.48■□□□□ 0.71
MSR1P21757 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MSR1P21757 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
MSR1P21757 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSR1P21757 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.47■□□□□ 0.71
MSR1P21757 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
MSR1P21757 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MSR1P21757 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MSR1P21757 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MSR1P21757 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
MSR1P21757 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MSR1P21757 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
MSR1P21757 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.46■□□□□ 0.71
MSR1P21757 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MSR1P21757 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.46■□□□□ 0.71
MSR1P21757 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.46■□□□□ 0.71
MSR1P21757 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.46■□□□□ 0.71
MSR1P21757 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MSR1P21757 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MSR1P21757 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.46■□□□□ 0.71
MSR1P21757 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MSR1P21757 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSR1P21757 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MSR1P21757 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms