Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 SHF-208ENST00000560734 1731 ntTSL 3 BASIC8.65□□□□□ -1.02
NEBP20929 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 AC113347.1-201ENST00000413321 391 ntBASIC8.65□□□□□ -1.02
NEBP20929 AC093787.1-201ENST00000450396 207 ntBASIC8.65□□□□□ -1.02
NEBP20929 HES2-205ENST00000487437 968 ntTSL 3 BASIC8.65□□□□□ -1.02
NEBP20929 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC8.65□□□□□ -1.02
NEBP20929 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
NEBP20929 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC8.65□□□□□ -1.02
NEBP20929 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
NEBP20929 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
NEBP20929 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC8.65□□□□□ -1.03
NEBP20929 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
NEBP20929 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC8.65□□□□□ -1.03
NEBP20929 AC087388.1-201ENST00000571370 1112 ntBASIC8.65□□□□□ -1.03
NEBP20929 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC8.65□□□□□ -1.03
NEBP20929 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
NEBP20929 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.03
NEBP20929 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC8.65□□□□□ -1.03
NEBP20929 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
NEBP20929 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
NEBP20929 AC012618.2-201ENST00000428058 849 ntBASIC8.65□□□□□ -1.03
NEBP20929 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
NEBP20929 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 MKRN4P-201ENST00000444706 1521 ntBASIC8.64□□□□□ -1.03
NEBP20929 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC8.64□□□□□ -1.03
NEBP20929 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC8.64□□□□□ -1.03
NEBP20929 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 UPK3BP1-201ENST00000428678 509 ntBASIC8.64□□□□□ -1.03
NEBP20929 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 KRT18P48-201ENST00000434763 852 ntBASIC8.64□□□□□ -1.03
NEBP20929 UBE2DNL-204ENST00000602536 740 ntBASIC8.64□□□□□ -1.03
NEBP20929 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC8.64□□□□□ -1.03
NEBP20929 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC8.64□□□□□ -1.03
NEBP20929 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC8.64□□□□□ -1.03
NEBP20929 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
NEBP20929 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC8.64□□□□□ -1.03
NEBP20929 AC087499.1-201ENST00000418141 1075 ntBASIC8.64□□□□□ -1.03
NEBP20929 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC8.64□□□□□ -1.03
NEBP20929 SPIB-206ENST00000596074 847 ntTSL 2 BASIC8.64□□□□□ -1.03
NEBP20929 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
NEBP20929 TESC-206ENST00000541210 936 ntTSL 3 BASIC8.63□□□□□ -1.03
NEBP20929 AC006557.6-201ENST00000623071 864 ntBASIC8.63□□□□□ -1.03
NEBP20929 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC8.63□□□□□ -1.03
NEBP20929 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 LINC02084-201ENST00000606069 1096 ntBASIC8.63□□□□□ -1.03
NEBP20929 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
NEBP20929 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC8.63□□□□□ -1.03
NEBP20929 NTF6B-201ENST00000591913 560 ntBASIC8.63□□□□□ -1.03
NEBP20929 AL353708.3-201ENST00000610272 989 ntBASIC8.63□□□□□ -1.03
NEBP20929 AC105233.4-201ENST00000642045 216 ntBASIC8.63□□□□□ -1.03
NEBP20929 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC8.63□□□□□ -1.03
NEBP20929 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NEBP20929 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NEBP20929 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC8.62□□□□□ -1.03
NEBP20929 MIR4785-201ENST00000585005 73 ntBASIC8.62□□□□□ -1.03
NEBP20929 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NEBP20929 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC8.62□□□□□ -1.03
NEBP20929 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms