Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRKCAP17252 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.37■□□□□ 0.85
PRKCAP17252 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRKCAP17252 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
PRKCAP17252 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRKCAP17252 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.37■□□□□ 0.85
PRKCAP17252 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.37■□□□□ 0.85
PRKCAP17252 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.37■□□□□ 0.85
PRKCAP17252 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRKCAP17252 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.36■□□□□ 0.85
PRKCAP17252 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.36■□□□□ 0.85
PRKCAP17252 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.36■□□□□ 0.85
PRKCAP17252 C17orf82-201ENST00000623772 1530 ntBASIC20.36■□□□□ 0.85
PRKCAP17252 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PRKCAP17252 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRKCAP17252 RNF165-205ENST00000588679 2904 ntBASIC20.36■□□□□ 0.85
PRKCAP17252 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PRKCAP17252 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 AC144652.1-201ENST00000609974 1624 ntBASIC20.35■□□□□ 0.85
PRKCAP17252 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.35■□□□□ 0.85
PRKCAP17252 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.35■□□□□ 0.85
PRKCAP17252 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.35■□□□□ 0.85
PRKCAP17252 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.35■□□□□ 0.85
PRKCAP17252 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.35■□□□□ 0.85
PRKCAP17252 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.35■□□□□ 0.85
PRKCAP17252 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRKCAP17252 LINC00565-201ENST00000562710 2331 ntBASIC20.35■□□□□ 0.85
PRKCAP17252 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.34■□□□□ 0.85
PRKCAP17252 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.34■□□□□ 0.85
PRKCAP17252 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.34■□□□□ 0.85
PRKCAP17252 AL512631.2-201ENST00000604634 923 ntBASIC20.34■□□□□ 0.85
PRKCAP17252 AC131212.1-201ENST00000613771 668 ntBASIC20.34■□□□□ 0.85
PRKCAP17252 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.34■□□□□ 0.85
PRKCAP17252 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 C1orf229-201ENST00000623686 2258 ntBASIC20.34■□□□□ 0.85
PRKCAP17252 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.34■□□□□ 0.85
PRKCAP17252 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRKCAP17252 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PRKCAP17252 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.33■□□□□ 0.85
PRKCAP17252 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRKCAP17252 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRKCAP17252 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRKCAP17252 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.33■□□□□ 0.85
PRKCAP17252 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.33■□□□□ 0.85
PRKCAP17252 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRKCAP17252 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRKCAP17252 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
PRKCAP17252 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.32■□□□□ 0.84
PRKCAP17252 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.32■□□□□ 0.84
PRKCAP17252 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PRKCAP17252 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PRKCAP17252 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRKCAP17252 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PRKCAP17252 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRKCAP17252 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRKCAP17252 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.31■□□□□ 0.84
PRKCAP17252 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.31■□□□□ 0.84
PRKCAP17252 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.31■□□□□ 0.84
PRKCAP17252 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PRKCAP17252 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
PRKCAP17252 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.31■□□□□ 0.84
PRKCAP17252 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PRKCAP17252 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.31■□□□□ 0.84
PRKCAP17252 FP325331.1-202ENST00000623531 1380 ntBASIC20.31■□□□□ 0.84
PRKCAP17252 DUSP8P3-201ENST00000399571 1760 ntBASIC20.31■□□□□ 0.84
PRKCAP17252 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.31■□□□□ 0.84
PRKCAP17252 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms