Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ACANP16112 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.4■□□□□ 0.54
ACANP16112 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.4■□□□□ 0.54
ACANP16112 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACANP16112 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACANP16112 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.39■□□□□ 0.53
ACANP16112 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ACANP16112 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ACANP16112 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ACANP16112 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.39■□□□□ 0.53
ACANP16112 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACANP16112 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ACANP16112 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ACANP16112 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
ACANP16112 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ACANP16112 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.38■□□□□ 0.53
ACANP16112 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 CNN2P6-201ENST00000439038 900 ntBASIC18.38■□□□□ 0.53
ACANP16112 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.38■□□□□ 0.53
ACANP16112 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.38■□□□□ 0.53
ACANP16112 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ACANP16112 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.38■□□□□ 0.53
ACANP16112 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
ACANP16112 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.38■□□□□ 0.53
ACANP16112 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.38■□□□□ 0.53
ACANP16112 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.38■□□□□ 0.53
ACANP16112 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ACANP16112 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ACANP16112 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.37■□□□□ 0.53
ACANP16112 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ACANP16112 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ACANP16112 RPS2P52-201ENST00000469610 820 ntBASIC18.37■□□□□ 0.53
ACANP16112 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.36■□□□□ 0.53
ACANP16112 AC007322.1-201ENST00000426983 750 ntBASIC18.36■□□□□ 0.53
ACANP16112 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACANP16112 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.35■□□□□ 0.53
ACANP16112 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.35■□□□□ 0.53
ACANP16112 AC005181.1-201ENST00000604782 1256 ntBASIC18.35■□□□□ 0.53
ACANP16112 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACANP16112 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.35■□□□□ 0.53
ACANP16112 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACANP16112 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACANP16112 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACANP16112 AC098590.1-201ENST00000468126 897 ntBASIC18.34■□□□□ 0.53
ACANP16112 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACANP16112 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.34■□□□□ 0.53
ACANP16112 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.34■□□□□ 0.53
ACANP16112 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACANP16112 AC135731.1-201ENST00000569415 2548 ntBASIC18.33■□□□□ 0.53
ACANP16112 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.33■□□□□ 0.53
ACANP16112 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.53
ACANP16112 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.53
ACANP16112 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.33■□□□□ 0.53
ACANP16112 AL121832.2-201ENST00000610979 668 ntBASIC18.33■□□□□ 0.53
ACANP16112 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.33■□□□□ 0.53
ACANP16112 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ACANP16112 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ACANP16112 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACANP16112 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
ACANP16112 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.33■□□□□ 0.52
ACANP16112 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.33■□□□□ 0.52
ACANP16112 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.32■□□□□ 0.52
ACANP16112 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACANP16112 SLC7A5P1-201ENST00000568957 537 ntBASIC18.32■□□□□ 0.52
ACANP16112 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ACANP16112 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ACANP16112 KRT18P29-201ENST00000397031 1267 ntBASIC18.32■□□□□ 0.52
ACANP16112 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.32■□□□□ 0.52
ACANP16112 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms