Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.3■□□□□ 0.36
CD28P10747 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.3■□□□□ 0.36
CD28P10747 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.3■□□□□ 0.36
CD28P10747 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.3■□□□□ 0.36
CD28P10747 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.3■□□□□ 0.36
CD28P10747 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD28P10747 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.3■□□□□ 0.36
CD28P10747 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.3■□□□□ 0.36
CD28P10747 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.3■□□□□ 0.36
CD28P10747 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD28P10747 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD28P10747 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CD28P10747 AC012414.1-201ENST00000556676 535 ntBASIC17.29■□□□□ 0.36
CD28P10747 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.29■□□□□ 0.36
CD28P10747 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CD28P10747 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.29■□□□□ 0.36
CD28P10747 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD28P10747 LINC01124-201ENST00000409786 2117 ntBASIC17.29■□□□□ 0.36
CD28P10747 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
CD28P10747 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CD28P10747 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.28■□□□□ 0.36
CD28P10747 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CD28P10747 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CD28P10747 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 AC027612.3-201ENST00000413684 1047 ntBASIC17.28■□□□□ 0.36
CD28P10747 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.28■□□□□ 0.36
CD28P10747 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.28■□□□□ 0.36
CD28P10747 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.28■□□□□ 0.36
CD28P10747 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.28■□□□□ 0.36
CD28P10747 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD28P10747 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.28■□□□□ 0.36
CD28P10747 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD28P10747 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD28P10747 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CD28P10747 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD28P10747 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CD28P10747 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CD28P10747 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD28P10747 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD28P10747 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
CD28P10747 KRT18P5-201ENST00000436075 1291 ntBASIC17.27■□□□□ 0.36
CD28P10747 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.27■□□□□ 0.36
CD28P10747 AL354811.1-201ENST00000610286 706 ntBASIC17.27■□□□□ 0.36
CD28P10747 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.27■□□□□ 0.36
CD28P10747 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.27■□□□□ 0.35
CD28P10747 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD28P10747 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CD28P10747 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD28P10747 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.27■□□□□ 0.35
CD28P10747 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.26■□□□□ 0.35
CD28P10747 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CD28P10747 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.26■□□□□ 0.35
CD28P10747 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.26■□□□□ 0.35
CD28P10747 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 DUX4L2-201ENST00000561772 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
CD28P10747 DUX4L6-201ENST00000626483 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4L1-201ENST00000627662 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4L8-201ENST00000629013 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4L3-201ENST00000630187 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4L7-201ENST00000630678 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 DUX4L5-201ENST00000630834 1275 ntBASIC17.26■□□□□ 0.35
CD28P10747 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.26■□□□□ 0.35
CD28P10747 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD28P10747 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD28P10747 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
CD28P10747 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms