Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.37■□□□□ 0.69
UBCP0CG48 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
UBCP0CG48 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 AC103834.1-201ENST00000520383 144 ntBASIC19.37■□□□□ 0.69
UBCP0CG48 AC103724.3-201ENST00000564481 992 ntBASIC19.37■□□□□ 0.69
UBCP0CG48 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.37■□□□□ 0.69
UBCP0CG48 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.37■□□□□ 0.69
UBCP0CG48 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 AC137630.3-201ENST00000607245 391 ntBASIC19.37■□□□□ 0.69
UBCP0CG48 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
UBCP0CG48 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
UBCP0CG48 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBCP0CG48 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.37■□□□□ 0.69
UBCP0CG48 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBCP0CG48 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UBCP0CG48 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
UBCP0CG48 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBCP0CG48 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.36■□□□□ 0.69
UBCP0CG48 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
UBCP0CG48 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBCP0CG48 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.35■□□□□ 0.69
UBCP0CG48 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UBCP0CG48 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 AC137767.1-201ENST00000602918 1920 ntBASIC19.35■□□□□ 0.69
UBCP0CG48 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBCP0CG48 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
UBCP0CG48 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.34■□□□□ 0.69
UBCP0CG48 KRT8P33-201ENST00000508125 1423 ntBASIC19.34■□□□□ 0.69
UBCP0CG48 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.34■□□□□ 0.69
UBCP0CG48 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
UBCP0CG48 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.34■□□□□ 0.69
UBCP0CG48 AL033527.3-201ENST00000566366 1196 ntBASIC19.34■□□□□ 0.69
UBCP0CG48 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
UBCP0CG48 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBCP0CG48 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.34■□□□□ 0.69
UBCP0CG48 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBCP0CG48 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBCP0CG48 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
UBCP0CG48 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBCP0CG48 AC005703.6-201ENST00000623265 1329 ntBASIC19.33■□□□□ 0.69
UBCP0CG48 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.33■□□□□ 0.68
UBCP0CG48 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.33■□□□□ 0.68
UBCP0CG48 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.33■□□□□ 0.68
UBCP0CG48 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.33■□□□□ 0.68
UBCP0CG48 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.33■□□□□ 0.68
UBCP0CG48 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBCP0CG48 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
UBCP0CG48 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 AL031848.2-201ENST00000607670 837 ntBASIC19.32■□□□□ 0.68
UBCP0CG48 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.32■□□□□ 0.68
UBCP0CG48 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.32■□□□□ 0.68
UBCP0CG48 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.32■□□□□ 0.68
UBCP0CG48 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.32■□□□□ 0.68
UBCP0CG48 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBCP0CG48 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
UBCP0CG48 LINC01529-204ENST00000636474 1715 ntBASIC19.31■□□□□ 0.68
UBCP0CG48 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBCP0CG48 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBCP0CG48 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBCP0CG48 AC092053.2-201ENST00000640557 1818 ntBASIC19.31■□□□□ 0.68
UBCP0CG48 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.31■□□□□ 0.68
UBCP0CG48 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
UBCP0CG48 MIR6722-201ENST00000617286 78 ntBASIC19.31■□□□□ 0.68
UBCP0CG48 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms