Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HMGN1P05114 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGN1P05114 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGN1P05114 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HMGN1P05114 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGN1P05114 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGN1P05114 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGN1P05114 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HMGN1P05114 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGN1P05114 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGN1P05114 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGN1P05114 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGN1P05114 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGN1P05114 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGN1P05114 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGN1P05114 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGN1P05114 PVT1_1.1-201ENST00000615125 194 ntBASIC20.01■□□□□ 0.79
HMGN1P05114 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGN1P05114 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HMGN1P05114 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGN1P05114 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20■□□□□ 0.79
HMGN1P05114 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HMGN1P05114 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMGN1P05114 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
HMGN1P05114 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 ATP5G2P3-201ENST00000429083 425 ntBASIC20■□□□□ 0.79
HMGN1P05114 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20■□□□□ 0.79
HMGN1P05114 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
HMGN1P05114 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGN1P05114 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGN1P05114 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGN1P05114 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGN1P05114 AC004987.1-201ENST00000428627 508 ntBASIC19.99■□□□□ 0.79
HMGN1P05114 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HMGN1P05114 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
HMGN1P05114 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMGN1P05114 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGN1P05114 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGN1P05114 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGN1P05114 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HMGN1P05114 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGN1P05114 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HMGN1P05114 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.98■□□□□ 0.79
HMGN1P05114 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGN1P05114 AC087742.1-201ENST00000575880 1738 ntBASIC19.98■□□□□ 0.79
HMGN1P05114 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGN1P05114 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGN1P05114 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGN1P05114 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGN1P05114 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGN1P05114 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGN1P05114 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGN1P05114 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HMGN1P05114 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 AC080038.3-201ENST00000623346 1952 ntBASIC19.97■□□□□ 0.79
HMGN1P05114 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HMGN1P05114 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGN1P05114 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGN1P05114 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGN1P05114 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGN1P05114 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGN1P05114 AC010980.1-201ENST00000587192 1142 ntBASIC19.96■□□□□ 0.79
HMGN1P05114 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGN1P05114 SNX5-217ENST00000606557 1087 ntBASIC19.96■□□□□ 0.79
HMGN1P05114 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGN1P05114 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGN1P05114 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HMGN1P05114 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms