Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 IRS3P-201ENST00000223076 1006 ntBASIC20.24■□□□□ 0.83
P04436 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.24■□□□□ 0.83
P04436 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.24■□□□□ 0.83
P04436 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 ANOS2P-203ENST00000472227 1816 ntBASIC20.24■□□□□ 0.83
P04436 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04436 AC004687.1-201ENST00000579003 1625 ntBASIC20.24■□□□□ 0.83
P04436 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04436 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04436 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.23■□□□□ 0.83
P04436 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
P04436 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
P04436 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
P04436 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.23■□□□□ 0.83
P04436 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
P04436 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.23■□□□□ 0.83
P04436 AC010525.1-201ENST00000585559 441 ntBASIC20.23■□□□□ 0.83
P04436 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04436 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
P04436 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.22■□□□□ 0.83
P04436 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.22■□□□□ 0.83
P04436 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
P04436 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
P04436 TSPY26P-201ENST00000476365 1326 ntBASIC20.22■□□□□ 0.83
P04436 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
P04436 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04436 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
P04436 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
P04436 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.21■□□□□ 0.83
P04436 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
P04436 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
P04436 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.21■□□□□ 0.83
P04436 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.21■□□□□ 0.83
P04436 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
P04436 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04436 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
P04436 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
P04436 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04436 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04436 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
P04436 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04436 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.2■□□□□ 0.82
P04436 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.2■□□□□ 0.82
P04436 IGHV3-19-201ENST00000521488 291 ntBASIC20.2■□□□□ 0.82
P04436 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.2■□□□□ 0.82
P04436 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.2■□□□□ 0.82
P04436 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04436 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P04436 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.2■□□□□ 0.82
P04436 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
P04436 AC092068.2-201ENST00000590491 1708 ntBASIC20.19■□□□□ 0.82
P04436 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P04436 AC093323.1-202ENST00000635031 2045 ntBASIC20.19■□□□□ 0.82
P04436 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.19■□□□□ 0.82
P04436 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
P04436 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04436 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
P04436 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.19■□□□□ 0.82
P04436 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.19■□□□□ 0.82
P04436 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04436 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P04436 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
P04436 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
P04436 AP005435.1-201ENST00000529293 1178 ntBASIC20.18■□□□□ 0.82
P04436 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
P04436 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.18■□□□□ 0.82
P04436 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
P04436 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P04436 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.17■□□□□ 0.82
P04436 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
P04436 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
P04436 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P04436 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
P04436 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.17■□□□□ 0.82
P04436 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
P04436 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.17■□□□□ 0.82
P04436 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.17■□□□□ 0.82
P04436 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.17■□□□□ 0.82
P04436 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P04436 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms