Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MT-ND3P03897 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 KRT16P3-201ENST00000439127 1283 ntBASIC22.47■■□□□ 1.19
MT-ND3P03897 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.47■■□□□ 1.19
MT-ND3P03897 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
MT-ND3P03897 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-ND3P03897 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.46■■□□□ 1.19
MT-ND3P03897 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
MT-ND3P03897 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-ND3P03897 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MT-ND3P03897 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.46■■□□□ 1.19
MT-ND3P03897 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.46■■□□□ 1.19
MT-ND3P03897 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-ND3P03897 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.46■■□□□ 1.19
MT-ND3P03897 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MT-ND3P03897 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
MT-ND3P03897 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
MT-ND3P03897 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND3P03897 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND3P03897 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND3P03897 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
MT-ND3P03897 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
MT-ND3P03897 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
MT-ND3P03897 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-ND3P03897 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.44■■□□□ 1.18
MT-ND3P03897 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.44■■□□□ 1.18
MT-ND3P03897 UNC93B8-201ENST00000511903 705 ntBASIC22.44■■□□□ 1.18
MT-ND3P03897 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
MT-ND3P03897 MIR4281-201ENST00000580852 62 ntBASIC22.44■■□□□ 1.18
MT-ND3P03897 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-ND3P03897 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
MT-ND3P03897 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
MT-ND3P03897 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-ND3P03897 AC008406.3-201ENST00000620001 1374 ntBASIC22.43■■□□□ 1.18
MT-ND3P03897 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-ND3P03897 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.43■■□□□ 1.18
MT-ND3P03897 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.43■■□□□ 1.18
MT-ND3P03897 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MT-ND3P03897 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MT-ND3P03897 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.42■■□□□ 1.18
MT-ND3P03897 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.42■■□□□ 1.18
MT-ND3P03897 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.42■■□□□ 1.18
MT-ND3P03897 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.42■■□□□ 1.18
MT-ND3P03897 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
MT-ND3P03897 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
MT-ND3P03897 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-ND3P03897 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
MT-ND3P03897 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-ND3P03897 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MT-ND3P03897 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.41■■□□□ 1.18
MT-ND3P03897 AC092028.1-203ENST00000608262 953 ntBASIC22.41■■□□□ 1.18
MT-ND3P03897 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.41■■□□□ 1.18
MT-ND3P03897 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.41■■□□□ 1.18
MT-ND3P03897 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.4■■□□□ 1.18
MT-ND3P03897 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
MT-ND3P03897 TSPY9P-201ENST00000440215 945 ntBASIC22.4■■□□□ 1.18
MT-ND3P03897 TSPY11P-201ENST00000442607 1045 ntBASIC22.4■■□□□ 1.18
MT-ND3P03897 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.4■■□□□ 1.18
MT-ND3P03897 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.4■■□□□ 1.18
MT-ND3P03897 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.4■■□□□ 1.18
MT-ND3P03897 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MT-ND3P03897 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
MT-ND3P03897 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms