Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 pRNA.11-201ENST00000618423 90 ntBASIC19.17■□□□□ 0.66
NGFP01138 pRNA.13-201ENST00000619112 90 ntBASIC19.17■□□□□ 0.66
NGFP01138 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NGFP01138 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NGFP01138 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 AC068473.5-201ENST00000616428 2072 ntBASIC19.16■□□□□ 0.66
NGFP01138 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NGFP01138 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NGFP01138 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NGFP01138 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.16■□□□□ 0.66
NGFP01138 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NGFP01138 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NGFP01138 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.16■□□□□ 0.66
NGFP01138 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.16■□□□□ 0.66
NGFP01138 MIR3181-201ENST00000578512 73 ntBASIC19.16■□□□□ 0.66
NGFP01138 AL499627.2-201ENST00000606283 725 ntBASIC19.16■□□□□ 0.66
NGFP01138 AC092171.4-201ENST00000609130 632 ntBASIC19.16■□□□□ 0.66
NGFP01138 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.16■□□□□ 0.66
NGFP01138 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.16■□□□□ 0.66
NGFP01138 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.16■□□□□ 0.66
NGFP01138 AC133561.1-201ENST00000568600 2415 ntBASIC19.15■□□□□ 0.66
NGFP01138 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
NGFP01138 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NGFP01138 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.15■□□□□ 0.66
NGFP01138 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.15■□□□□ 0.66
NGFP01138 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NGFP01138 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NGFP01138 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.15■□□□□ 0.66
NGFP01138 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NGFP01138 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NGFP01138 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.15■□□□□ 0.66
NGFP01138 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NGFP01138 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NGFP01138 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NGFP01138 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NGFP01138 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.14■□□□□ 0.65
NGFP01138 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NGFP01138 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.14■□□□□ 0.65
NGFP01138 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.14■□□□□ 0.65
NGFP01138 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NGFP01138 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 SYT6-210ENST00000641643 1587 ntBASIC19.14■□□□□ 0.65
NGFP01138 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NGFP01138 AC004687.1-201ENST00000579003 1625 ntBASIC19.14■□□□□ 0.65
NGFP01138 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NGFP01138 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NGFP01138 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NGFP01138 C1orf229-201ENST00000623686 2258 ntBASIC19.13■□□□□ 0.65
NGFP01138 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NGFP01138 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NGFP01138 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NGFP01138 SERBP1P1-201ENST00000396021 1160 ntBASIC19.13■□□□□ 0.65
NGFP01138 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.13■□□□□ 0.65
NGFP01138 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.13■□□□□ 0.65
NGFP01138 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
NGFP01138 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NGFP01138 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
NGFP01138 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.13■□□□□ 0.65
NGFP01138 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
NGFP01138 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.12■□□□□ 0.65
NGFP01138 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NGFP01138 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
NGFP01138 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NGFP01138 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NGFP01138 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.12■□□□□ 0.65
NGFP01138 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.12■□□□□ 0.65
NGFP01138 DUX4L19-201ENST00000557448 1267 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms