Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.31■■□□□ 1
SNRNP200O75643 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.31■■□□□ 1
SNRNP200O75643 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.31■■□□□ 1
SNRNP200O75643 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.31■■□□□ 1
SNRNP200O75643 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.31■■□□□ 1
SNRNP200O75643 AC142381.2-201ENST00000566120 298 ntBASIC21.31■■□□□ 1
SNRNP200O75643 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SNRNP200O75643 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SNRNP200O75643 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SNRNP200O75643 AC005837.3-201ENST00000612163 286 ntBASIC21.31■■□□□ 1
SNRNP200O75643 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.31■■□□□ 1
SNRNP200O75643 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SNRNP200O75643 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SNRNP200O75643 RASA4CP-201ENST00000424092 1398 ntBASIC21.3■■□□□ 1
SNRNP200O75643 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNRNP200O75643 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SNRNP200O75643 AC099791.1-201ENST00000416440 715 ntBASIC21.3■■□□□ 1
SNRNP200O75643 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SNRNP200O75643 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.3■■□□□ 1
SNRNP200O75643 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.3■■□□□ 1
SNRNP200O75643 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.29■■□□□ 1
SNRNP200O75643 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.29■■□□□ 1
SNRNP200O75643 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP200O75643 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SNRNP200O75643 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP200O75643 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.29■■□□□ 1
SNRNP200O75643 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.29■■□□□ 1
SNRNP200O75643 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.29■■□□□ 1
SNRNP200O75643 AC008764.7-201ENST00000593779 1081 ntBASIC21.29■■□□□ 1
SNRNP200O75643 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP200O75643 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP200O75643 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNRNP200O75643 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.28■■□□□ 1
SNRNP200O75643 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.28■■□□□ 1
SNRNP200O75643 AC105265.2-201ENST00000467189 838 ntBASIC21.28■■□□□ 1
SNRNP200O75643 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
SNRNP200O75643 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP200O75643 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.28■■□□□ 1
SNRNP200O75643 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.28■■□□□ 1
SNRNP200O75643 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.28■■□□□ 1
SNRNP200O75643 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SNRNP200O75643 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRNP200O75643 BX842568.3-201ENST00000418104 571 ntBASIC21.28■■□□□ 1
SNRNP200O75643 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.27■■□□□ 1
SNRNP200O75643 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SNRNP200O75643 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SNRNP200O75643 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.27■■□□□ 1
SNRNP200O75643 AL136967.2-201ENST00000623968 743 ntBASIC21.27■■□□□ 1
SNRNP200O75643 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.27■■□□□ 1
SNRNP200O75643 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRNP200O75643 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.27■□□□□ 0.99
SNRNP200O75643 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
SNRNP200O75643 DUSP8P5-201ENST00000422884 1815 ntBASIC21.26■□□□□ 0.99
SNRNP200O75643 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP200O75643 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRNP200O75643 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 LINC01960-201ENST00000563759 1884 ntBASIC21.26■□□□□ 0.99
SNRNP200O75643 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRNP200O75643 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.26■□□□□ 0.99
SNRNP200O75643 AL355001.2-201ENST00000620617 1191 ntBASIC21.26■□□□□ 0.99
SNRNP200O75643 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.26■□□□□ 0.99
SNRNP200O75643 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRNP200O75643 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SNRNP200O75643 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP200O75643 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SNRNP200O75643 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRNP200O75643 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRNP200O75643 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRNP200O75643 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRNP200O75643 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.25■□□□□ 0.99
SNRNP200O75643 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNRNP200O75643 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.24■□□□□ 0.99
SNRNP200O75643 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRNP200O75643 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.24■□□□□ 0.99
SNRNP200O75643 AC027682.1-201ENST00000562846 899 ntBASIC21.24■□□□□ 0.99
SNRNP200O75643 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNRNP200O75643 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRNP200O75643 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNRNP200O75643 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.23■□□□□ 0.99
SNRNP200O75643 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNRNP200O75643 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.23■□□□□ 0.99
SNRNP200O75643 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms