Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.88■□□□□ 0.77
PFDN1O60925 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PFDN1O60925 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.87■□□□□ 0.77
PFDN1O60925 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 ESRRAP2-201ENST00000418437 1549 ntBASIC19.87■□□□□ 0.77
PFDN1O60925 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PFDN1O60925 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN1O60925 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PFDN1O60925 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN1O60925 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PFDN1O60925 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
PFDN1O60925 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PFDN1O60925 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN1O60925 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PFDN1O60925 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN1O60925 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
PFDN1O60925 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.87■□□□□ 0.77
PFDN1O60925 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PFDN1O60925 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PFDN1O60925 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.86■□□□□ 0.77
PFDN1O60925 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.86■□□□□ 0.77
PFDN1O60925 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PFDN1O60925 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PFDN1O60925 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PFDN1O60925 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PFDN1O60925 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.85■□□□□ 0.77
PFDN1O60925 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 DYNLL1-208ENST00000550178 581 ntBASIC19.85■□□□□ 0.77
PFDN1O60925 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.85■□□□□ 0.77
PFDN1O60925 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PFDN1O60925 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.84■□□□□ 0.77
PFDN1O60925 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PFDN1O60925 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.84■□□□□ 0.77
PFDN1O60925 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.84■□□□□ 0.77
PFDN1O60925 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PFDN1O60925 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.84■□□□□ 0.77
PFDN1O60925 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
PFDN1O60925 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PFDN1O60925 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PFDN1O60925 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.83■□□□□ 0.77
PFDN1O60925 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PFDN1O60925 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PFDN1O60925 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.83■□□□□ 0.77
PFDN1O60925 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PFDN1O60925 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PFDN1O60925 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PFDN1O60925 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.76
PFDN1O60925 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PFDN1O60925 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PFDN1O60925 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PFDN1O60925 AC006077.2-201ENST00000623591 457 ntBASIC19.82■□□□□ 0.76
PFDN1O60925 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.82■□□□□ 0.76
PFDN1O60925 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms