Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF2O60811 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF2O60811 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF2O60811 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF2O60811 AC105265.2-201ENST00000467189 838 ntBASIC20.77■□□□□ 0.92
PRAMEF2O60811 AC091305.1-201ENST00000479476 895 ntBASIC20.77■□□□□ 0.92
PRAMEF2O60811 DUX4L4-201ENST00000566884 1269 ntBASIC20.77■□□□□ 0.92
PRAMEF2O60811 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEF2O60811 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PRAMEF2O60811 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PRAMEF2O60811 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEF2O60811 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEF2O60811 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEF2O60811 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF2O60811 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF2O60811 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEF2O60811 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF2O60811 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.75■□□□□ 0.91
PRAMEF2O60811 RARRES2P6-201ENST00000567333 442 ntBASIC20.75■□□□□ 0.91
PRAMEF2O60811 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF2O60811 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEF2O60811 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF2O60811 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF2O60811 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEF2O60811 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF2O60811 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF2O60811 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEF2O60811 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEF2O60811 AC009086.3-201ENST00000623486 1008 ntBASIC20.74■□□□□ 0.91
PRAMEF2O60811 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEF2O60811 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PRAMEF2O60811 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRAMEF2O60811 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PRAMEF2O60811 RASA4CP-201ENST00000424092 1398 ntBASIC20.72■□□□□ 0.91
PRAMEF2O60811 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.71■□□□□ 0.91
PRAMEF2O60811 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF2O60811 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF2O60811 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.71■□□□□ 0.91
PRAMEF2O60811 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.71■□□□□ 0.91
PRAMEF2O60811 AC027682.1-201ENST00000562846 899 ntBASIC20.71■□□□□ 0.91
PRAMEF2O60811 CA15P2-201ENST00000611168 834 ntBASIC20.71■□□□□ 0.91
PRAMEF2O60811 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRAMEF2O60811 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRAMEF2O60811 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRAMEF2O60811 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEF2O60811 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF2O60811 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 AC136469.2-201ENST00000623944 1028 ntBASIC20.7■□□□□ 0.9
PRAMEF2O60811 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF2O60811 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms