Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPHS1O60500 AC007375.3-201ENST00000600936 2314 ntBASIC21.63■■□□□ 1.05
NPHS1O60500 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPHS1O60500 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPHS1O60500 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPHS1O60500 FP325331.1-202ENST00000623531 1380 ntBASIC21.62■■□□□ 1.05
NPHS1O60500 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPHS1O60500 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
NPHS1O60500 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.62■■□□□ 1.05
NPHS1O60500 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.62■■□□□ 1.05
NPHS1O60500 LINC01529-204ENST00000636474 1715 ntBASIC21.62■■□□□ 1.05
NPHS1O60500 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPHS1O60500 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NPHS1O60500 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPHS1O60500 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPHS1O60500 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NPHS1O60500 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.61■■□□□ 1.05
NPHS1O60500 AC103834.1-201ENST00000520383 144 ntBASIC21.61■■□□□ 1.05
NPHS1O60500 AC137630.3-201ENST00000607245 391 ntBASIC21.61■■□□□ 1.05
NPHS1O60500 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NPHS1O60500 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.61■■□□□ 1.05
NPHS1O60500 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPHS1O60500 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPHS1O60500 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NPHS1O60500 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPHS1O60500 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.6■■□□□ 1.05
NPHS1O60500 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.6■■□□□ 1.05
NPHS1O60500 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPHS1O60500 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.6■■□□□ 1.05
NPHS1O60500 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NPHS1O60500 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPHS1O60500 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPHS1O60500 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NPHS1O60500 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPHS1O60500 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.6■■□□□ 1.05
NPHS1O60500 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.59■■□□□ 1.05
NPHS1O60500 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NPHS1O60500 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NPHS1O60500 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPHS1O60500 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPHS1O60500 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NPHS1O60500 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.58■■□□□ 1.05
NPHS1O60500 AC103724.3-201ENST00000564481 992 ntBASIC21.58■■□□□ 1.05
NPHS1O60500 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.58■■□□□ 1.05
NPHS1O60500 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NPHS1O60500 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
NPHS1O60500 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 AC005703.6-201ENST00000623265 1329 ntBASIC21.57■■□□□ 1.04
NPHS1O60500 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.57■■□□□ 1.04
NPHS1O60500 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.57■■□□□ 1.04
NPHS1O60500 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.57■■□□□ 1.04
NPHS1O60500 MIR6722-201ENST00000617286 78 ntBASIC21.57■■□□□ 1.04
NPHS1O60500 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
NPHS1O60500 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPHS1O60500 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NPHS1O60500 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NPHS1O60500 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NPHS1O60500 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.56■■□□□ 1.04
NPHS1O60500 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NPHS1O60500 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.56■■□□□ 1.04
NPHS1O60500 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.56■■□□□ 1.04
NPHS1O60500 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.56■■□□□ 1.04
NPHS1O60500 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.56■■□□□ 1.04
NPHS1O60500 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
NPHS1O60500 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NPHS1O60500 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NPHS1O60500 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPHS1O60500 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NPHS1O60500 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NPHS1O60500 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NPHS1O60500 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.55■■□□□ 1.04
NPHS1O60500 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.55■■□□□ 1.04
NPHS1O60500 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NPHS1O60500 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NPHS1O60500 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NPHS1O60500 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NPHS1O60500 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms