Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC47A1P1-202ENST00000449666 945 ntBASIC20.03■□□□□ 0.8
ZIC3O60481 AC091305.1-201ENST00000479476 895 ntBASIC20.03■□□□□ 0.8
ZIC3O60481 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.03■□□□□ 0.8
ZIC3O60481 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZIC3O60481 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZIC3O60481 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZIC3O60481 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZIC3O60481 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZIC3O60481 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZIC3O60481 AC099791.1-201ENST00000416440 715 ntBASIC20.02■□□□□ 0.8
ZIC3O60481 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZIC3O60481 AC027682.1-201ENST00000562846 899 ntBASIC20.02■□□□□ 0.8
ZIC3O60481 AC010525.1-201ENST00000585559 441 ntBASIC20.02■□□□□ 0.8
ZIC3O60481 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZIC3O60481 RASA4CP-201ENST00000424092 1398 ntBASIC20.02■□□□□ 0.8
ZIC3O60481 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.02■□□□□ 0.8
ZIC3O60481 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZIC3O60481 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.02■□□□□ 0.79
ZIC3O60481 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZIC3O60481 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.01■□□□□ 0.79
ZIC3O60481 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZIC3O60481 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ZIC3O60481 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.01■□□□□ 0.79
ZIC3O60481 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.01■□□□□ 0.79
ZIC3O60481 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZIC3O60481 OR2I1P-207ENST00000453522 948 ntBASIC20.01■□□□□ 0.79
ZIC3O60481 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.01■□□□□ 0.79
ZIC3O60481 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ZIC3O60481 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZIC3O60481 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZIC3O60481 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZIC3O60481 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 CA15P2-201ENST00000611168 834 ntBASIC20■□□□□ 0.79
ZIC3O60481 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ZIC3O60481 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZIC3O60481 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20■□□□□ 0.79
ZIC3O60481 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZIC3O60481 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ZIC3O60481 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZIC3O60481 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.99■□□□□ 0.79
ZIC3O60481 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ZIC3O60481 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.99■□□□□ 0.79
ZIC3O60481 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.99■□□□□ 0.79
ZIC3O60481 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZIC3O60481 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZIC3O60481 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZIC3O60481 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.99■□□□□ 0.79
ZIC3O60481 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZIC3O60481 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZIC3O60481 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ZIC3O60481 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZIC3O60481 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZIC3O60481 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.98■□□□□ 0.79
ZIC3O60481 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
ZIC3O60481 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ZIC3O60481 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.98■□□□□ 0.79
ZIC3O60481 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZIC3O60481 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
ZIC3O60481 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
ZIC3O60481 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZIC3O60481 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZIC3O60481 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZIC3O60481 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.97■□□□□ 0.79
ZIC3O60481 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.97■□□□□ 0.79
ZIC3O60481 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZIC3O60481 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZIC3O60481 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZIC3O60481 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
ZIC3O60481 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ZIC3O60481 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZIC3O60481 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZIC3O60481 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ZIC3O60481 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZIC3O60481 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZIC3O60481 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZIC3O60481 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.95■□□□□ 0.78
ZIC3O60481 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZIC3O60481 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZIC3O60481 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ZIC3O60481 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.95■□□□□ 0.78
ZIC3O60481 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZIC3O60481 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
ZIC3O60481 AC126544.1-201ENST00000580842 1059 ntBASIC19.95■□□□□ 0.78
ZIC3O60481 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.95■□□□□ 0.78
ZIC3O60481 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.95■□□□□ 0.78
ZIC3O60481 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZIC3O60481 DUSP8P5-201ENST00000422884 1815 ntBASIC19.95■□□□□ 0.78
ZIC3O60481 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms