Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 DUX4L4-201ENST00000566884 1269 ntBASIC20.95■□□□□ 0.95
URB1O60287 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
URB1O60287 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
URB1O60287 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
URB1O60287 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
URB1O60287 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.95■□□□□ 0.94
URB1O60287 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.95■□□□□ 0.94
URB1O60287 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.95■□□□□ 0.94
URB1O60287 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.95■□□□□ 0.94
URB1O60287 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
URB1O60287 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
URB1O60287 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.95■□□□□ 0.94
URB1O60287 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
URB1O60287 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
URB1O60287 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.94■□□□□ 0.94
URB1O60287 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.94■□□□□ 0.94
URB1O60287 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
URB1O60287 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.94■□□□□ 0.94
URB1O60287 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.94■□□□□ 0.94
URB1O60287 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.94■□□□□ 0.94
URB1O60287 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
URB1O60287 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.94■□□□□ 0.94
URB1O60287 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
URB1O60287 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
URB1O60287 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.93■□□□□ 0.94
URB1O60287 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.93■□□□□ 0.94
URB1O60287 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.93■□□□□ 0.94
URB1O60287 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
URB1O60287 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.93■□□□□ 0.94
URB1O60287 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
URB1O60287 AC083906.2-201ENST00000511578 360 ntBASIC20.93■□□□□ 0.94
URB1O60287 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.93■□□□□ 0.94
URB1O60287 AC011767.1-201ENST00000617410 1153 ntBASIC20.93■□□□□ 0.94
URB1O60287 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
URB1O60287 AC069152.1-201ENST00000438030 544 ntBASIC20.92■□□□□ 0.94
URB1O60287 MFSD11-216ENST00000590393 1141 ntBASIC20.92■□□□□ 0.94
URB1O60287 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
URB1O60287 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
URB1O60287 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.92■□□□□ 0.94
URB1O60287 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.92■□□□□ 0.94
URB1O60287 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
URB1O60287 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
URB1O60287 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.92■□□□□ 0.94
URB1O60287 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
URB1O60287 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
URB1O60287 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.91■□□□□ 0.94
URB1O60287 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 AC073210.2-201ENST00000430369 194 ntBASIC20.91■□□□□ 0.94
URB1O60287 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
URB1O60287 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
URB1O60287 AC135731.1-201ENST00000569415 2548 ntBASIC20.9■□□□□ 0.94
URB1O60287 OR2I1P-207ENST00000453522 948 ntBASIC20.9■□□□□ 0.94
URB1O60287 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.9■□□□□ 0.94
URB1O60287 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.9■□□□□ 0.94
URB1O60287 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
URB1O60287 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.9■□□□□ 0.94
URB1O60287 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
URB1O60287 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
URB1O60287 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
URB1O60287 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
URB1O60287 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
URB1O60287 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.9■□□□□ 0.94
URB1O60287 AL050303.2-201ENST00000619798 666 ntBASIC20.9■□□□□ 0.94
URB1O60287 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.9■□□□□ 0.94
URB1O60287 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.89■□□□□ 0.94
URB1O60287 FAM201B-201ENST00000458407 597 ntBASIC20.89■□□□□ 0.94
URB1O60287 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.89■□□□□ 0.94
URB1O60287 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
URB1O60287 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
URB1O60287 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
URB1O60287 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
URB1O60287 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.89■□□□□ 0.93
URB1O60287 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
URB1O60287 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
URB1O60287 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms