Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PRICKLE3O43900 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE3O43900 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE3O43900 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE3O43900 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE3O43900 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 AC005837.3-201ENST00000612163 286 ntBASIC21.34■■□□□ 1.01
PRICKLE3O43900 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE3O43900 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PRICKLE3O43900 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE3O43900 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE3O43900 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.33■■□□□ 1.01
PRICKLE3O43900 AL355001.2-201ENST00000620617 1191 ntBASIC21.33■■□□□ 1.01
PRICKLE3O43900 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE3O43900 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE3O43900 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE3O43900 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE3O43900 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE3O43900 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.32■■□□□ 1
PRICKLE3O43900 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE3O43900 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE3O43900 OR2I1P-207ENST00000453522 948 ntBASIC21.32■■□□□ 1
PRICKLE3O43900 AC004687.1-201ENST00000579003 1625 ntBASIC21.32■■□□□ 1
PRICKLE3O43900 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE3O43900 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PRICKLE3O43900 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE3O43900 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PRICKLE3O43900 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.31■■□□□ 1
PRICKLE3O43900 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PRICKLE3O43900 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
PRICKLE3O43900 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRICKLE3O43900 BX842568.3-201ENST00000418104 571 ntBASIC21.3■■□□□ 1
PRICKLE3O43900 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE3O43900 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRICKLE3O43900 AP001330.3-201ENST00000520123 633 ntBASIC21.3■■□□□ 1
PRICKLE3O43900 AL136967.2-201ENST00000623968 743 ntBASIC21.3■■□□□ 1
PRICKLE3O43900 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.3■■□□□ 1
PRICKLE3O43900 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.3■■□□□ 1
PRICKLE3O43900 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRICKLE3O43900 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE3O43900 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.29■■□□□ 1
PRICKLE3O43900 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PRICKLE3O43900 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PRICKLE3O43900 SLC47A1P1-202ENST00000449666 945 ntBASIC21.29■■□□□ 1
PRICKLE3O43900 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE3O43900 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.29■■□□□ 1
PRICKLE3O43900 AC010525.1-201ENST00000585559 441 ntBASIC21.29■■□□□ 1
PRICKLE3O43900 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.29■■□□□ 1
PRICKLE3O43900 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE3O43900 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE3O43900 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.28■■□□□ 1
PRICKLE3O43900 MIR939-201ENST00000401314 82 ntBASIC21.28■■□□□ 1
PRICKLE3O43900 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.28■■□□□ 1
PRICKLE3O43900 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.28■■□□□ 1
PRICKLE3O43900 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE3O43900 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PRICKLE3O43900 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE3O43900 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE3O43900 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PRICKLE3O43900 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PRICKLE3O43900 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE3O43900 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE3O43900 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.27■■□□□ 1
PRICKLE3O43900 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.27■■□□□ 1
PRICKLE3O43900 AC233992.3-201ENST00000607491 485 ntBASIC21.27■■□□□ 1
PRICKLE3O43900 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE3O43900 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE3O43900 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE3O43900 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRICKLE3O43900 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE3O43900 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE3O43900 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE3O43900 AF213884.3-201ENST00000563833 479 ntBASIC21.26■□□□□ 0.99
PRICKLE3O43900 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE3O43900 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PRICKLE3O43900 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRICKLE3O43900 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.25■□□□□ 0.99
PRICKLE3O43900 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE3O43900 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE3O43900 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.25■□□□□ 0.99
PRICKLE3O43900 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.25■□□□□ 0.99
PRICKLE3O43900 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE3O43900 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms