Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 AC097381.1-201ENST00000429019 1296 ntBASIC19■□□□□ 0.63
PHF1O43189 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 AC024257.2-201ENST00000549699 147 ntBASIC19■□□□□ 0.63
PHF1O43189 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PHF1O43189 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19■□□□□ 0.63
PHF1O43189 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHF1O43189 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PHF1O43189 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF1O43189 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.99■□□□□ 0.63
PHF1O43189 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.99■□□□□ 0.63
PHF1O43189 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHF1O43189 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PHF1O43189 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.98■□□□□ 0.63
PHF1O43189 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PHF1O43189 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PHF1O43189 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.98■□□□□ 0.63
PHF1O43189 AC087623.3-201ENST00000607047 1098 ntBASIC18.98■□□□□ 0.63
PHF1O43189 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PHF1O43189 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PHF1O43189 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHF1O43189 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PHF1O43189 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PHF1O43189 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PHF1O43189 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PHF1O43189 AC233723.2-201ENST00000623798 2106 ntBASIC18.97■□□□□ 0.63
PHF1O43189 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PHF1O43189 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.97■□□□□ 0.63
PHF1O43189 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHF1O43189 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PHF1O43189 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PHF1O43189 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.97■□□□□ 0.63
PHF1O43189 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF1O43189 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF1O43189 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF1O43189 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.96■□□□□ 0.63
PHF1O43189 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHF1O43189 AF213884.3-201ENST00000563833 479 ntBASIC18.96■□□□□ 0.63
PHF1O43189 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
PHF1O43189 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PHF1O43189 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.96■□□□□ 0.63
PHF1O43189 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF1O43189 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PHF1O43189 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF1O43189 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF1O43189 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF1O43189 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF1O43189 SRD5A1P1-201ENST00000442297 786 ntBASIC18.95■□□□□ 0.62
PHF1O43189 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.95■□□□□ 0.62
PHF1O43189 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.95■□□□□ 0.62
PHF1O43189 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PHF1O43189 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF1O43189 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.95■□□□□ 0.62
PHF1O43189 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PHF1O43189 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.95■□□□□ 0.62
PHF1O43189 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.94■□□□□ 0.62
PHF1O43189 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF1O43189 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PHF1O43189 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF1O43189 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms