Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 XPO1-209ENST00000443240 565 ntTSL 44.31□□□□□ -1.722e-9■□□□□ 8.9
EIF3DO15371 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.06□□□□□ -1.765e-6■□□□□ 8.9
EIF3DO15371 XPO1-207ENST00000436018 318 ntTSL 43.95□□□□□ -1.782e-9■□□□□ 8.9
EIF3DO15371 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.825e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-203ENST00000593293 764 ntTSL 33.44□□□□□ -1.865e-6■□□□□ 8.9
EIF3DO15371 SPP1-205ENST00000505146 252 ntTSL 33.22□□□□□ -1.895e-6■□□□□ 8.9
EIF3DO15371 SPP1-206ENST00000508002 568 ntTSL 1 (best)2.84□□□□□ -1.955e-6■□□□□ 8.9
EIF3DO15371 AC138932.1-201ENST00000534164 6830 ntBASIC18.95■□□□□ 0.621e-11■□□□□ 8.9
EIF3DO15371 NPIPA1-203ENST00000472413 5345 ntTSL 216.92■□□□□ 0.31e-11■□□□□ 8.9
EIF3DO15371 NPIPA1-206ENST00000541836 2747 ntTSL 514.57□□□□□ -0.081e-11■□□□□ 8.9
EIF3DO15371 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■□□□□ 8.8
EIF3DO15371 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.431e-6■□□□□ 8.8
EIF3DO15371 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.111e-7■□□□□ 8.8
EIF3DO15371 RALY-206ENST00000448364 1204 ntTSL 226.3■■□□□ 1.81e-7■□□□□ 8.8
EIF3DO15371 RALY-204ENST00000413297 766 ntTSL 522.39■■□□□ 1.171e-7■□□□□ 8.8
EIF3DO15371 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.631e-7■□□□□ 8.8
EIF3DO15371 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.55■□□□□ 0.247e-11■□□□□ 8.8
EIF3DO15371 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.792e-7■□□□□ 8.8
EIF3DO15371 DST-203ENST00000340834 5024 ntTSL 28.03□□□□□ -1.121e-7■□□□□ 8.8
EIF3DO15371 ERO1A-206ENST00000556039 1855 ntTSL 533.61■■■□□ 2.971e-7■□□□□ 8.8
EIF3DO15371 ERO1A-203ENST00000554019 2094 ntTSL 530.51■■■□□ 2.481e-7■□□□□ 8.8
EIF3DO15371 MAGI1-205ENST00000464060 2247 ntTSL 1 (best)25.88■■□□□ 1.731e-7■□□□□ 8.8
EIF3DO15371 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.85■■□□□ 1.733e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.08■■□□□ 1.613e-12■□□□□ 8.8
EIF3DO15371 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)22.04■■□□□ 1.121e-7■□□□□ 8.8
EIF3DO15371 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.841e-7■□□□□ 8.8
EIF3DO15371 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.673e-12■□□□□ 8.8
EIF3DO15371 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.391e-7■□□□□ 8.8
EIF3DO15371 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.31e-7■□□□□ 8.8
EIF3DO15371 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)16.73■□□□□ 0.273e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.263e-12■□□□□ 8.8
EIF3DO15371 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.54■□□□□ 0.241e-7■□□□□ 8.8
EIF3DO15371 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)16.13■□□□□ 0.173e-12■□□□□ 8.8
EIF3DO15371 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)15.81■□□□□ 0.121e-7■□□□□ 8.8
EIF3DO15371 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.74■□□□□ 0.111e-7■□□□□ 8.8
EIF3DO15371 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.031e-7■□□□□ 8.8
EIF3DO15371 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.021e-7■□□□□ 8.8
EIF3DO15371 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.073e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.35□□□□□ -0.113e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-218ENST00000601309 672 ntTSL 513.72□□□□□ -0.213e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC12.57□□□□□ -0.43e-12■□□□□ 8.8
EIF3DO15371 HNRNPUL1-211ENST00000597725 573 ntTSL 410.39□□□□□ -0.753e-12■□□□□ 8.8
EIF3DO15371 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.321e-84■□□□□ 8.8
EIF3DO15371 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.09□□□□□ -1.431e-84■□□□□ 8.8
EIF3DO15371 AFP-205ENST00000513720 197 ntTSL 1 (best)4.06□□□□□ -1.761e-84■□□□□ 8.8
EIF3DO15371 AFP-207ENST00000515675 317 ntTSL 1 (best)3.5□□□□□ -1.851e-84■□□□□ 8.8
EIF3DO15371 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.48□□□□□ -0.256e-46■□□□□ 8.8
EIF3DO15371 BIRC5-208ENST00000590925 648 ntTSL 1 (best)19.32■□□□□ 0.682e-8■□□□□ 8.8
EIF3DO15371 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.95■□□□□ 0.622e-8■□□□□ 8.8
EIF3DO15371 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.35■□□□□ 0.212e-8■□□□□ 8.8
EIF3DO15371 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.192e-8■□□□□ 8.8
EIF3DO15371 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.56□□□□□ -0.242e-8■□□□□ 8.8
EIF3DO15371 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.76□□□□□ -0.372e-8■□□□□ 8.8
EIF3DO15371 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.642e-7■□□□□ 8.8
EIF3DO15371 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.26■□□□□ 0.192e-7■□□□□ 8.8
EIF3DO15371 NOL4L-204ENST00000375677 541 ntTSL 312.86□□□□□ -0.352e-7■□□□□ 8.8
EIF3DO15371 PLXNB1-211ENST00000470525 835 ntTSL 517.76■□□□□ 0.436e-8■□□□□ 8.8
EIF3DO15371 PLXNB1-214ENST00000478171 576 ntTSL 317.26■□□□□ 0.356e-8■□□□□ 8.8
EIF3DO15371 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC14.03□□□□□ -0.166e-8■□□□□ 8.8
EIF3DO15371 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.956e-8■□□□□ 8.8
EIF3DO15371 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.026e-8■□□□□ 8.8
EIF3DO15371 TRRAP-205ENST00000456197 11654 ntAPPRIS ALT2 TSL 1 (best)8.53□□□□□ -1.046e-8■□□□□ 8.8
EIF3DO15371 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.076e-8■□□□□ 8.8
EIF3DO15371 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.246e-8■□□□□ 8.8
EIF3DO15371 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.65e-6■□□□□ 8.8
EIF3DO15371 STK25-209ENST00000424537 781 ntTSL 228.12■■■□□ 2.095e-6■□□□□ 8.8
EIF3DO15371 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.92■■□□□ 1.748e-8■□□□□ 8.8
EIF3DO15371 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.69■■□□□ 1.75e-6■□□□□ 8.8
EIF3DO15371 F7-205ENST00000479674 767 ntTSL 525.31■■□□□ 1.645e-6■□□□□ 8.8
EIF3DO15371 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.93■■□□□ 1.585e-6■□□□□ 8.8
EIF3DO15371 ZNF503-AS2-203ENST00000484411 1125 ntTSL 1 (best)24.04■■□□□ 1.445e-6■□□□□ 8.8
EIF3DO15371 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.78■■□□□ 1.45e-6■□□□□ 8.8
EIF3DO15371 SLC2A14-216ENST00000542782 682 ntTSL 223.25■■□□□ 1.315e-6■□□□□ 8.8
EIF3DO15371 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.265e-6■□□□□ 8.8
EIF3DO15371 ZNF503-AS2-205ENST00000491557 1006 ntTSL 222.8■■□□□ 1.245e-6■□□□□ 8.8
EIF3DO15371 SLC2A14-210ENST00000537557 578 ntTSL 322.65■■□□□ 1.225e-6■□□□□ 8.8
EIF3DO15371 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.27■■□□□ 1.165e-6■□□□□ 8.8
EIF3DO15371 STK25-213ENST00000436402 600 ntTSL 522.25■■□□□ 1.155e-6■□□□□ 8.8
EIF3DO15371 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.91■■□□□ 1.15e-6■□□□□ 8.8
EIF3DO15371 F7-203ENST00000444337 564 ntTSL 521.62■■□□□ 1.055e-6■□□□□ 8.8
EIF3DO15371 STK25-229ENST00000492127 1153 ntTSL 221.53■■□□□ 1.045e-6■□□□□ 8.8
EIF3DO15371 STK25-217ENST00000442307 923 ntTSL 221.48■■□□□ 1.035e-6■□□□□ 8.8
EIF3DO15371 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.885e-6■□□□□ 8.8
EIF3DO15371 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.46■□□□□ 0.875e-6■□□□□ 8.8
EIF3DO15371 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.85e-6■□□□□ 8.8
EIF3DO15371 STK25-211ENST00000429279 580 ntTSL 420.06■□□□□ 0.85e-6■□□□□ 8.8
EIF3DO15371 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.04■□□□□ 0.88e-8■□□□□ 8.8
EIF3DO15371 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.768e-8■□□□□ 8.8
EIF3DO15371 STK25-218ENST00000450497 882 ntTSL 519.66■□□□□ 0.745e-6■□□□□ 8.8
EIF3DO15371 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.78e-8■□□□□ 8.8
EIF3DO15371 SLC2A14-206ENST00000535344 561 ntTSL 419.44■□□□□ 0.75e-6■□□□□ 8.8
EIF3DO15371 F7-204ENST00000473085 558 ntTSL 419.4■□□□□ 0.75e-6■□□□□ 8.8
EIF3DO15371 STK25-228ENST00000487962 2024 ntTSL 219.1■□□□□ 0.655e-6■□□□□ 8.8
EIF3DO15371 SLC2A14-207ENST00000535383 665 ntTSL 219■□□□□ 0.635e-6■□□□□ 8.8
EIF3DO15371 ZNF503-AS2-204ENST00000486015 628 ntTSL 318.55■□□□□ 0.565e-6■□□□□ 8.8
EIF3DO15371 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.555e-6■□□□□ 8.8
EIF3DO15371 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.525e-6■□□□□ 8.8
EIF3DO15371 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.468e-8■□□□□ 8.8
EIF3DO15371 DDX42-212ENST00000581135 589 ntTSL 417.86■□□□□ 0.458e-8■□□□□ 8.8
EIF3DO15371 STK25-208ENST00000423004 773 ntTSL 216.14■□□□□ 0.175e-6■□□□□ 8.8
Retrieved 100 of 4,069 protein–RNA pairs in 22.1 ms