Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SNPHO15079 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SNPHO15079 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SNPHO15079 C1orf229-201ENST00000623686 2258 ntBASIC20.7■□□□□ 0.9
SNPHO15079 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.7■□□□□ 0.9
SNPHO15079 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.7■□□□□ 0.9
SNPHO15079 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNPHO15079 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.7■□□□□ 0.9
SNPHO15079 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNPHO15079 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNPHO15079 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNPHO15079 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNPHO15079 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SNPHO15079 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SNPHO15079 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNPHO15079 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNPHO15079 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNPHO15079 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNPHO15079 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.69■□□□□ 0.9
SNPHO15079 MIR4466-201ENST00000606121 54 ntBASIC20.69■□□□□ 0.9
SNPHO15079 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SNPHO15079 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.69■□□□□ 0.9
SNPHO15079 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
SNPHO15079 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNPHO15079 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.69■□□□□ 0.9
SNPHO15079 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SNPHO15079 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
SNPHO15079 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.68■□□□□ 0.9
SNPHO15079 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
SNPHO15079 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.68■□□□□ 0.9
SNPHO15079 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SNPHO15079 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SNPHO15079 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNPHO15079 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.67■□□□□ 0.9
SNPHO15079 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNPHO15079 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.67■□□□□ 0.9
SNPHO15079 AL136116.3-201ENST00000402907 1138 ntBASIC20.67■□□□□ 0.9
SNPHO15079 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.67■□□□□ 0.9
SNPHO15079 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNPHO15079 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNPHO15079 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNPHO15079 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNPHO15079 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNPHO15079 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.67■□□□□ 0.9
SNPHO15079 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SNPHO15079 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.66■□□□□ 0.9
SNPHO15079 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNPHO15079 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
SNPHO15079 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNPHO15079 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNPHO15079 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SNPHO15079 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SNPHO15079 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.65■□□□□ 0.9
SNPHO15079 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
SNPHO15079 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNPHO15079 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNPHO15079 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SNPHO15079 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNPHO15079 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
SNPHO15079 AC004812.2-201ENST00000611079 2094 ntBASIC20.65■□□□□ 0.9
SNPHO15079 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNPHO15079 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNPHO15079 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNPHO15079 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SNPHO15079 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SNPHO15079 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.64■□□□□ 0.89
SNPHO15079 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 AC009102.2-201ENST00000606772 1639 ntBASIC20.64■□□□□ 0.89
SNPHO15079 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNPHO15079 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.63■□□□□ 0.89
SNPHO15079 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
SNPHO15079 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SNPHO15079 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SNPHO15079 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNPHO15079 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.63■□□□□ 0.89
SNPHO15079 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.63■□□□□ 0.89
SNPHO15079 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms