Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC36.67■■■■□ 3.46
CHD1O14646 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
CHD1O14646 BX005040.4-201ENST00000637145 1518 ntBASIC36.66■■■■□ 3.46
CHD1O14646 EI24-204ENST00000527235 1625 ntTSL 5 BASIC36.66■■■■□ 3.46
CHD1O14646 RARA-203ENST00000394086 2008 ntTSL 2 BASIC36.66■■■■□ 3.46
CHD1O14646 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
CHD1O14646 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC36.66■■■■□ 3.46
CHD1O14646 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC36.66■■■■□ 3.46
CHD1O14646 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC36.66■■■■□ 3.46
CHD1O14646 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC36.65■■■■□ 3.46
CHD1O14646 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
CHD1O14646 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC36.65■■■■□ 3.46
CHD1O14646 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
CHD1O14646 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CHD1O14646 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC36.64■■■■□ 3.46
CHD1O14646 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CHD1O14646 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC36.64■■■■□ 3.46
CHD1O14646 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC36.64■■■■□ 3.46
CHD1O14646 SLC7A5P1-201ENST00000568957 537 ntBASIC36.64■■■■□ 3.46
CHD1O14646 ALDH1A3-203ENST00000557963 1670 ntBASIC36.64■■■■□ 3.46
CHD1O14646 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC36.64■■■■□ 3.46
CHD1O14646 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.46
CHD1O14646 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC36.63■■■■□ 3.45
CHD1O14646 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
CHD1O14646 PFKL-212ENST00000628044 129 ntTSL 3 BASIC36.63■■■■□ 3.45
CHD1O14646 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
CHD1O14646 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
CHD1O14646 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC36.62■■■■□ 3.45
CHD1O14646 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC36.62■■■■□ 3.45
CHD1O14646 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
CHD1O14646 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
CHD1O14646 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC36.62■■■■□ 3.45
CHD1O14646 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC36.62■■■■□ 3.45
CHD1O14646 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC36.62■■■■□ 3.45
CHD1O14646 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC36.61■■■■□ 3.45
CHD1O14646 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC36.61■■■■□ 3.45
CHD1O14646 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC36.61■■■■□ 3.45
CHD1O14646 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC36.61■■■■□ 3.45
CHD1O14646 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
CHD1O14646 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
CHD1O14646 AL161729.1-201ENST00000604104 1402 ntBASIC36.6■■■■□ 3.45
CHD1O14646 SLC6A10P-202ENST00000431994 2058 ntBASIC36.6■■■■□ 3.45
CHD1O14646 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CHD1O14646 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC36.59■■■■□ 3.45
CHD1O14646 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC36.59■■■■□ 3.45
CHD1O14646 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
CHD1O14646 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CHD1O14646 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
CHD1O14646 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC36.59■■■■□ 3.45
CHD1O14646 RNA5SP413-201ENST00000516373 109 ntBASIC36.59■■■■□ 3.45
CHD1O14646 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC36.58■■■■□ 3.45
CHD1O14646 CNN2P6-201ENST00000439038 900 ntBASIC36.58■■■■□ 3.45
CHD1O14646 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC36.58■■■■□ 3.45
CHD1O14646 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC36.58■■■■□ 3.45
CHD1O14646 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CHD1O14646 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC36.58■■■■□ 3.45
CHD1O14646 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC36.58■■■■□ 3.45
CHD1O14646 AC007322.1-201ENST00000426983 750 ntBASIC36.57■■■■□ 3.45
CHD1O14646 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC36.57■■■■□ 3.45
CHD1O14646 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC36.57■■■■□ 3.44
CHD1O14646 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
CHD1O14646 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC36.57■■■■□ 3.44
CHD1O14646 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
CHD1O14646 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC36.56■■■■□ 3.44
CHD1O14646 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC36.56■■■■□ 3.44
CHD1O14646 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC36.56■■■■□ 3.44
CHD1O14646 CPT2-209ENST00000636935 803 ntTSL 5 BASIC36.56■■■■□ 3.44
CHD1O14646 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC36.56■■■■□ 3.44
CHD1O14646 KRT18P29-201ENST00000397031 1267 ntBASIC36.56■■■■□ 3.44
CHD1O14646 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC36.56■■■■□ 3.44
CHD1O14646 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
CHD1O14646 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
CHD1O14646 AC133041.1-202ENST00000642053 222 ntBASIC36.55■■■■□ 3.44
CHD1O14646 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC36.54■■■■□ 3.44
CHD1O14646 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC36.54■■■■□ 3.44
CHD1O14646 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
CHD1O14646 STX4-202ENST00000394998 1498 ntTSL 2 BASIC36.53■■■■□ 3.44
CHD1O14646 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
CHD1O14646 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC36.53■■■■□ 3.44
CHD1O14646 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC36.53■■■■□ 3.44
CHD1O14646 AF201337.1-201ENST00000520239 748 ntBASIC36.53■■■■□ 3.44
CHD1O14646 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC36.53■■■■□ 3.44
CHD1O14646 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC36.53■■■■□ 3.44
CHD1O14646 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CHD1O14646 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC36.51■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms