Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.57■■□□□ 1.04
UBFD1O14562 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
UBFD1O14562 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UBFD1O14562 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
UBFD1O14562 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.57■■□□□ 1.04
UBFD1O14562 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.57■■□□□ 1.04
UBFD1O14562 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UBFD1O14562 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UBFD1O14562 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBFD1O14562 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UBFD1O14562 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBFD1O14562 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
UBFD1O14562 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBFD1O14562 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.56■■□□□ 1.04
UBFD1O14562 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.56■■□□□ 1.04
UBFD1O14562 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UBFD1O14562 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.56■■□□□ 1.04
UBFD1O14562 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.55■■□□□ 1.04
UBFD1O14562 AC005703.6-201ENST00000623265 1329 ntBASIC21.55■■□□□ 1.04
UBFD1O14562 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.55■■□□□ 1.04
UBFD1O14562 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBFD1O14562 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UBFD1O14562 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.55■■□□□ 1.04
UBFD1O14562 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UBFD1O14562 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBFD1O14562 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UBFD1O14562 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UBFD1O14562 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
UBFD1O14562 LINC01529-204ENST00000636474 1715 ntBASIC21.55■■□□□ 1.04
UBFD1O14562 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBFD1O14562 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBFD1O14562 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
UBFD1O14562 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UBFD1O14562 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UBFD1O14562 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.54■■□□□ 1.04
UBFD1O14562 AC007375.3-201ENST00000600936 2314 ntBASIC21.54■■□□□ 1.04
UBFD1O14562 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
UBFD1O14562 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UBFD1O14562 AC092053.2-201ENST00000640557 1818 ntBASIC21.53■■□□□ 1.04
UBFD1O14562 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.53■■□□□ 1.04
UBFD1O14562 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.53■■□□□ 1.04
UBFD1O14562 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UBFD1O14562 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
UBFD1O14562 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.52■■□□□ 1.04
UBFD1O14562 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.52■■□□□ 1.04
UBFD1O14562 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
UBFD1O14562 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
UBFD1O14562 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.52■■□□□ 1.04
UBFD1O14562 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBFD1O14562 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
UBFD1O14562 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.52■■□□□ 1.04
UBFD1O14562 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBFD1O14562 FP325331.1-202ENST00000623531 1380 ntBASIC21.51■■□□□ 1.03
UBFD1O14562 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBFD1O14562 C11orf96-202ENST00000528572 1834 ntBASIC21.51■■□□□ 1.03
UBFD1O14562 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
UBFD1O14562 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
UBFD1O14562 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.51■■□□□ 1.03
UBFD1O14562 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBFD1O14562 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBFD1O14562 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.51■■□□□ 1.03
UBFD1O14562 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBFD1O14562 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
UBFD1O14562 BX664725.1-201ENST00000438252 379 ntBASIC21.49■■□□□ 1.03
UBFD1O14562 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBFD1O14562 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBFD1O14562 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBFD1O14562 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBFD1O14562 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.48■■□□□ 1.03
UBFD1O14562 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBFD1O14562 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.48■■□□□ 1.03
UBFD1O14562 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBFD1O14562 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
UBFD1O14562 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.48■■□□□ 1.03
UBFD1O14562 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBFD1O14562 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBFD1O14562 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.47■■□□□ 1.03
UBFD1O14562 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
UBFD1O14562 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms