Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
UPK2O00526 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UPK2O00526 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.76■□□□□ 0.43
UPK2O00526 KRT125P-201ENST00000546827 989 ntBASIC17.76■□□□□ 0.43
UPK2O00526 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK2O00526 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
UPK2O00526 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.75■□□□□ 0.43
UPK2O00526 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK2O00526 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK2O00526 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UPK2O00526 Z92544.1-202ENST00000571933 1220 ntBASIC17.75■□□□□ 0.43
UPK2O00526 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UPK2O00526 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK2O00526 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.75■□□□□ 0.43
UPK2O00526 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK2O00526 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK2O00526 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UPK2O00526 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPK2O00526 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
UPK2O00526 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK2O00526 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 DUX4L4-201ENST00000566884 1269 ntBASIC17.74■□□□□ 0.43
UPK2O00526 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK2O00526 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 AC087742.1-201ENST00000575880 1738 ntBASIC17.74■□□□□ 0.43
UPK2O00526 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPK2O00526 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK2O00526 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK2O00526 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK2O00526 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK2O00526 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UPK2O00526 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK2O00526 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK2O00526 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPK2O00526 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
UPK2O00526 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPK2O00526 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK2O00526 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK2O00526 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 AC139530.1-201ENST00000575312 1977 ntBASIC17.72■□□□□ 0.43
UPK2O00526 MTDHP2-201ENST00000601468 714 ntBASIC17.72■□□□□ 0.43
UPK2O00526 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 AC009086.3-201ENST00000623486 1008 ntBASIC17.72■□□□□ 0.43
UPK2O00526 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
UPK2O00526 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK2O00526 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.72■□□□□ 0.43
UPK2O00526 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UPK2O00526 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UPK2O00526 AC092053.2-201ENST00000640557 1818 ntBASIC17.71■□□□□ 0.43
UPK2O00526 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.71■□□□□ 0.43
UPK2O00526 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 MIR4787-201ENST00000607364 84 ntBASIC17.71■□□□□ 0.43
UPK2O00526 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
UPK2O00526 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UPK2O00526 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK2O00526 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UPK2O00526 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms