Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.67■□□□□ 0.58
SIRPB1O00241 KRT16P3-201ENST00000439127 1283 ntBASIC18.67■□□□□ 0.58
SIRPB1O00241 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.67■□□□□ 0.58
SIRPB1O00241 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.67■□□□□ 0.58
SIRPB1O00241 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.67■□□□□ 0.58
SIRPB1O00241 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.67■□□□□ 0.58
SIRPB1O00241 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIRPB1O00241 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SIRPB1O00241 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPB1O00241 AL117328.2-201ENST00000624617 1940 ntBASIC18.66■□□□□ 0.58
SIRPB1O00241 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SIRPB1O00241 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPB1O00241 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.66■□□□□ 0.58
SIRPB1O00241 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPB1O00241 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIRPB1O00241 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SIRPB1O00241 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SIRPB1O00241 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.65■□□□□ 0.58
SIRPB1O00241 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SIRPB1O00241 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.65■□□□□ 0.58
SIRPB1O00241 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.65■□□□□ 0.58
SIRPB1O00241 MIR6724-1-201ENST00000616420 92 ntBASIC18.65■□□□□ 0.58
SIRPB1O00241 MIR6724-2-201ENST00000616483 92 ntBASIC18.65■□□□□ 0.58
SIRPB1O00241 MIR6724-4-201ENST00000617390 92 ntBASIC18.65■□□□□ 0.58
SIRPB1O00241 MIR6724-3-201ENST00000622482 92 ntBASIC18.65■□□□□ 0.58
SIRPB1O00241 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.65■□□□□ 0.58
SIRPB1O00241 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIRPB1O00241 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.65■□□□□ 0.58
SIRPB1O00241 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.64■□□□□ 0.57
SIRPB1O00241 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.64■□□□□ 0.57
SIRPB1O00241 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.64■□□□□ 0.57
SIRPB1O00241 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SIRPB1O00241 FP325331.1-202ENST00000623531 1380 ntBASIC18.64■□□□□ 0.57
SIRPB1O00241 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SIRPB1O00241 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPB1O00241 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIRPB1O00241 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SIRPB1O00241 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SIRPB1O00241 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPB1O00241 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.63■□□□□ 0.57
SIRPB1O00241 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPB1O00241 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.63■□□□□ 0.57
SIRPB1O00241 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SIRPB1O00241 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPB1O00241 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIRPB1O00241 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
SIRPB1O00241 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SIRPB1O00241 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.62■□□□□ 0.57
SIRPB1O00241 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.62■□□□□ 0.57
SIRPB1O00241 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.62■□□□□ 0.57
SIRPB1O00241 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPB1O00241 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 GUSBP5-202ENST00000510805 1989 ntBASIC18.62■□□□□ 0.57
SIRPB1O00241 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPB1O00241 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
SIRPB1O00241 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 AC079834.2-201ENST00000609776 1949 ntBASIC18.61■□□□□ 0.57
SIRPB1O00241 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SIRPB1O00241 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 GUSBP5-201ENST00000418136 578 ntBASIC18.61■□□□□ 0.57
SIRPB1O00241 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.61■□□□□ 0.57
SIRPB1O00241 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.61■□□□□ 0.57
SIRPB1O00241 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPB1O00241 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SIRPB1O00241 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms