Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM4A7MD48 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SRRM4A7MD48 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.83■□□□□ 0.45
SRRM4A7MD48 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM4A7MD48 DUX4L4-201ENST00000566884 1269 ntBASIC17.83■□□□□ 0.44
SRRM4A7MD48 AL035685.1-201ENST00000636663 812 ntBASIC17.83■□□□□ 0.44
SRRM4A7MD48 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SRRM4A7MD48 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.83■□□□□ 0.44
SRRM4A7MD48 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SRRM4A7MD48 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SRRM4A7MD48 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM4A7MD48 LINC00526-201ENST00000581067 1875 ntBASIC17.82■□□□□ 0.44
SRRM4A7MD48 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM4A7MD48 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.82■□□□□ 0.44
SRRM4A7MD48 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM4A7MD48 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM4A7MD48 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SRRM4A7MD48 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SRRM4A7MD48 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SRRM4A7MD48 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SRRM4A7MD48 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SRRM4A7MD48 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 ECEL1P1-201ENST00000373592 1742 ntBASIC17.81■□□□□ 0.44
SRRM4A7MD48 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 AC127496.7-201ENST00000625110 1798 ntBASIC17.81■□□□□ 0.44
SRRM4A7MD48 AC087742.1-201ENST00000575880 1738 ntBASIC17.81■□□□□ 0.44
SRRM4A7MD48 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SRRM4A7MD48 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SRRM4A7MD48 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM4A7MD48 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 MIR6724-1-201ENST00000616420 92 ntBASIC17.8■□□□□ 0.44
SRRM4A7MD48 MIR6724-2-201ENST00000616483 92 ntBASIC17.8■□□□□ 0.44
SRRM4A7MD48 MIR6724-4-201ENST00000617390 92 ntBASIC17.8■□□□□ 0.44
SRRM4A7MD48 MIR6724-3-201ENST00000622482 92 ntBASIC17.8■□□□□ 0.44
SRRM4A7MD48 C17orf82-201ENST00000623772 1530 ntBASIC17.8■□□□□ 0.44
SRRM4A7MD48 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM4A7MD48 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM4A7MD48 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SRRM4A7MD48 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.8■□□□□ 0.44
SRRM4A7MD48 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SRRM4A7MD48 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SRRM4A7MD48 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.78■□□□□ 0.44
SRRM4A7MD48 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.78■□□□□ 0.44
SRRM4A7MD48 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 AC242852.2-201ENST00000615738 1807 ntBASIC17.78■□□□□ 0.44
SRRM4A7MD48 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.78■□□□□ 0.44
SRRM4A7MD48 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SRRM4A7MD48 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM4A7MD48 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM4A7MD48 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM4A7MD48 LINC00565-201ENST00000562710 2331 ntBASIC17.77■□□□□ 0.44
SRRM4A7MD48 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.77■□□□□ 0.44
SRRM4A7MD48 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM4A7MD48 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SRRM4A7MD48 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.77■□□□□ 0.44
SRRM4A7MD48 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SRRM4A7MD48 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms