Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RBFOX3A6NFN3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RBFOX3A6NFN3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RBFOX3A6NFN3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RBFOX3A6NFN3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RBFOX3A6NFN3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RBFOX3A6NFN3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 DUX4L29-201ENST00000425409 679 ntBASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 AL157384.1-201ENST00000445995 2473 ntBASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RBFOX3A6NFN3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RBFOX3A6NFN3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RBFOX3A6NFN3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RBFOX3A6NFN3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms