Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC189A1A4V9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 MIR6722-201ENST00000617286 78 ntBASIC22.06■■□□□ 1.12
CCDC189A1A4V9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC189A1A4V9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 AL137060.1-201ENST00000618151 2648 ntBASIC22.05■■□□□ 1.12
CCDC189A1A4V9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 AL031848.2-201ENST00000607670 837 ntBASIC22.05■■□□□ 1.12
CCDC189A1A4V9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC189A1A4V9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 AC079630.1-202ENST00000618127 1840 ntBASIC22.04■■□□□ 1.12
CCDC189A1A4V9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC189A1A4V9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC189A1A4V9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 AC021242.3-201ENST00000607598 1377 ntBASIC22.02■■□□□ 1.12
CCDC189A1A4V9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC189A1A4V9 ESRRAP2-201ENST00000418437 1549 ntBASIC22.01■■□□□ 1.11
CCDC189A1A4V9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC189A1A4V9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22■■□□□ 1.11
CCDC189A1A4V9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22■■□□□ 1.11
CCDC189A1A4V9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC189A1A4V9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC189A1A4V9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC189A1A4V9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.99■■□□□ 1.11
CCDC189A1A4V9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC189A1A4V9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CCDC189A1A4V9 KRT8P33-201ENST00000508125 1423 ntBASIC21.98■■□□□ 1.11
CCDC189A1A4V9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms