Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SYT6-210ENST00000641643 1587 ntBASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 C1orf229-201ENST00000623686 2258 ntBASIC17.73■□□□□ 0.43
TCRBV4S1A1TA0A5B7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 ALDH1A3-203ENST00000557963 1670 ntBASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AC024257.2-201ENST00000549699 147 ntBASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV4S1A1TA0A5B7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TCRBV4S1A1TA0A5B7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TCRBV4S1A1TA0A5B7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV4S1A1TA0A5B7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 AC009102.2-201ENST00000606772 1639 ntBASIC17.69■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 EDA-201ENST00000338901 1233 ntBASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 AC099791.2-201ENST00000605725 427 ntBASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 AL355001.2-201ENST00000620617 1191 ntBASIC17.68■□□□□ 0.42
TCRBV4S1A1TA0A5B7 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms