Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.26■■□□□ 1.31
TCRBV5S1A1TA0A578 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 AC006455.2-201ENST00000429931 906 ntBASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 GUSBP5-202ENST00000510805 1989 ntBASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TCRBV5S1A1TA0A578 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 AC241377.3-202ENST00000626088 1088 ntBASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 AC241585.3-202ENST00000628937 1088 ntBASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 AC245100.8-202ENST00000629247 1058 ntBASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TCRBV5S1A1TA0A578 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV5S1A1TA0A578 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 AC004687.1-201ENST00000579003 1625 ntBASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 MIR4466-201ENST00000606121 54 ntBASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.22■■□□□ 1.31
TCRBV5S1A1TA0A578 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 AC099791.2-201ENST00000605725 427 ntBASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 AC079834.2-201ENST00000609776 1949 ntBASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.21■■□□□ 1.31
TCRBV5S1A1TA0A578 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 ECEL1P1-201ENST00000373592 1742 ntBASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV5S1A1TA0A578 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 EP400NL-214ENST00000641289 2402 ntBASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TCRBV5S1A1TA0A578 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms