Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 GUSBP5-202ENST00000510805 1989 ntBASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC127496.7-201ENST00000625110 1798 ntBASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-4A0A1B0GX49 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 AL117332.1-201ENST00000622628 974 ntBASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-4A0A1B0GX49 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC241377.3-202ENST00000626088 1088 ntBASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC241585.3-202ENST00000628937 1088 ntBASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC245100.8-202ENST00000629247 1058 ntBASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-4A0A1B0GX49 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 ECEL1P1-201ENST00000373592 1742 ntBASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 AC242852.2-201ENST00000615738 1807 ntBASIC15.59■□□□□ 0.09
TRBV6-4A0A1B0GX49 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRBV6-4A0A1B0GX49 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-4A0A1B0GX49 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-4A0A1B0GX49 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 GUSBP5-201ENST00000418136 578 ntBASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-4A0A1B0GX49 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 AL356740.2-201ENST00000601559 647 ntBASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-4A0A1B0GX49 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms