Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV20A0A0B4J274 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV20A0A0B4J274 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 CA15P2-201ENST00000611168 834 ntBASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 AC009086.3-201ENST00000623486 1008 ntBASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 AC136469.2-201ENST00000623944 1028 ntBASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV20A0A0B4J274 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 MIR5787-201ENST00000611784 55 ntBASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV20A0A0B4J274 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 HLA-L-211ENST00000482052 1765 ntBASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV20A0A0B4J274 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 AC026271.2-201ENST00000428091 497 ntBASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 AC008764.7-201ENST00000593779 1081 ntBASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TRAV20A0A0B4J274 AL391422.3-201ENST00000603791 2761 ntBASIC18.64■□□□□ 0.58
TRAV20A0A0B4J274 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 ALDH1A3-203ENST00000557963 1670 ntBASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 C1orf229-201ENST00000623686 2258 ntBASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV20A0A0B4J274 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV20A0A0B4J274 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV20A0A0B4J274 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms