Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IGHV3-43A0A0B4J1X8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43A0A0B4J1X8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV3-43A0A0B4J1X8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
IGHV3-43A0A0B4J1X8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 AC009102.2-201ENST00000606772 1639 ntBASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV3-43A0A0B4J1X8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 EP400NL-214ENST00000641289 2402 ntBASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
IGHV3-43A0A0B4J1X8 LINC01529-204ENST00000636474 1715 ntBASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.33■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 KRT16P3-201ENST00000439127 1283 ntBASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGHV3-43A0A0B4J1X8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 GUSBP5-202ENST00000510805 1989 ntBASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AC079834.2-201ENST00000609776 1949 ntBASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV3-43A0A0B4J1X8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MIR6724-1-201ENST00000616420 92 ntBASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MIR6724-2-201ENST00000616483 92 ntBASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MIR6724-4-201ENST00000617390 92 ntBASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MIR6724-3-201ENST00000622482 92 ntBASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.3■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV3-43A0A0B4J1X8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV3-43A0A0B4J1X8 FP325331.1-202ENST00000623531 1380 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms