Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV8-1A0A0A6YYK1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 U85056.1-201ENST00000616429 682 ntBASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV8-1A0A0A6YYK1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.77■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC022616.5-201ENST00000518796 181 ntBASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC120024.1-201ENST00000562672 995 ntBASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AF131216.4-201ENST00000638924 1588 ntBASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 AC087742.1-201ENST00000575880 1738 ntBASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-1A0A0A6YYK1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-1A0A0A6YYK1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms