Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRAV30A0A087WSZ9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRAV30A0A087WSZ9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 KRT125P-201ENST00000546827 989 ntBASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAV30A0A087WSZ9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 GUSBP5-202ENST00000510805 1989 ntBASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 LINC01529-204ENST00000636474 1715 ntBASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV30A0A087WSZ9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 Z92544.1-202ENST00000571933 1220 ntBASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV30A0A087WSZ9 ECEL1P1-201ENST00000373592 1742 ntBASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV30A0A087WSZ9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 AC092028.1-203ENST00000608262 953 ntBASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 AC127496.7-201ENST00000625110 1798 ntBASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV30A0A087WSZ9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 AC242852.2-201ENST00000615738 1807 ntBASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV30A0A087WSZ9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV30A0A087WSZ9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms