Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV9-1A0A075B6T8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV9-1A0A075B6T8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-1A0A075B6T8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 KRT18P10-201ENST00000388836 1287 ntBASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-1A0A075B6T8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 MIR3665-201ENST00000578708 105 ntBASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV9-1A0A075B6T8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 AC087742.1-201ENST00000575880 1738 ntBASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 AL157384.1-201ENST00000445995 2473 ntBASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
TRAV9-1A0A075B6T8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-1A0A075B6T8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV9-1A0A075B6T8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms