Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
IGKV2-28A0A075B6P5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 RPS2P7-201ENST00000447334 885 ntBASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 AL592293.1-201ENST00000502889 1188 ntBASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.6□□□□□ -0.07
IGKV2-28A0A075B6P5 AC079630.1-202ENST00000618127 1840 ntBASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 AC090877.2-201ENST00000558441 1738 ntBASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGKV2-28A0A075B6P5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGKV2-28A0A075B6P5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGKV2-28A0A075B6P5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGKV2-28A0A075B6P5 AC073130.3-201ENST00000624389 2278 ntBASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 AC080038.3-201ENST00000623346 1952 ntBASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IGKV2-28A0A075B6P5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGKV2-28A0A075B6P5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
IGKV2-28A0A075B6P5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms