Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.85□□□□□ -0.51
AP3S1Q92572 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.85□□□□□ -0.51
AP3S1Q92572 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.85□□□□□ -0.51
AP3S1Q92572 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.85□□□□□ -0.51
AP3S1Q92572 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.85□□□□□ -0.51
AP3S1Q92572 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.85□□□□□ -0.51
AP3S1Q92572 MIR5189-201ENST00000577370 114 ntBASIC11.85□□□□□ -0.51
AP3S1Q92572 GNRHR2-203ENST00000581100 1187 ntBASIC11.85□□□□□ -0.51
AP3S1Q92572 AC005962.1-201ENST00000584100 773 ntBASIC11.85□□□□□ -0.51
AP3S1Q92572 AC009118.2-201ENST00000613275 655 ntBASIC11.85□□□□□ -0.51
AP3S1Q92572 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC11.85□□□□□ -0.51
AP3S1Q92572 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
AP3S1Q92572 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.85□□□□□ -0.51
AP3S1Q92572 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.85□□□□□ -0.51
AP3S1Q92572 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC11.85□□□□□ -0.51
AP3S1Q92572 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP3S1Q92572 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.84□□□□□ -0.51
AP3S1Q92572 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.84□□□□□ -0.51
AP3S1Q92572 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
AP3S1Q92572 AC138951.2-201ENST00000623455 1161 ntBASIC11.84□□□□□ -0.51
AP3S1Q92572 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 IMPDH1P8-201ENST00000413639 1525 ntBASIC11.84□□□□□ -0.51
AP3S1Q92572 JAML-211ENST00000533261 1508 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
AP3S1Q92572 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.84□□□□□ -0.51
AP3S1Q92572 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP3S1Q92572 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP3S1Q92572 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms