Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 PMEL-218ENST00000552882 2516 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 PIH1D2-207ENST00000530641 1838 ntTSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 URM1-203ENST00000372853 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 HDAC8-214ENST00000439122 2338 ntTSL 2 BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 AC016590.1-205ENST00000612804 2303 ntBASIC9.98□□□□□ -0.81
HIST1H2BCP62807 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
HIST1H2BCP62807 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SVEP1-201ENST00000374461 3257 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AC055813.1-201ENST00000587110 2123 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 KIF18BP1-201ENST00000567585 2264 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 ACTBP8-201ENST00000403258 1108 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AP001582.1-201ENST00000525856 295 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AGER-214ENST00000538695 487 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AC027601.3-201ENST00000622907 509 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 AL645504.1-201ENST00000429443 1809 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PPEF2-201ENST00000286719 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LOXL3-201ENST00000264094 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 TMBIM7P-202ENST00000641474 1516 ntBASIC9.97□□□□□ -0.81
HIST1H2BCP62807 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
HIST1H2BCP62807 BEND3P2-201ENST00000414425 2254 ntBASIC9.96□□□□□ -0.81
HIST1H2BCP62807 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 DLG1-215ENST00000448528 2977 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC9.96□□□□□ -0.81
HIST1H2BCP62807 LINC01429-201ENST00000438154 2326 ntTSL 2 BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms