Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZIC3O60481 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.02□□□□□ -0.48
ZIC3O60481 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ZIC3O60481 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZIC3O60481 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZIC3O60481 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZIC3O60481 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.02□□□□□ -0.48
ZIC3O60481 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.48
ZIC3O60481 FAM183BP-201ENST00000409072 1595 ntBASIC12.02□□□□□ -0.49
ZIC3O60481 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.02□□□□□ -0.49
ZIC3O60481 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ZIC3O60481 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.02□□□□□ -0.49
ZIC3O60481 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.02□□□□□ -0.49
ZIC3O60481 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.02□□□□□ -0.49
ZIC3O60481 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 KRT8P34-201ENST00000577607 1044 ntBASIC12.02□□□□□ -0.49
ZIC3O60481 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.02□□□□□ -0.49
ZIC3O60481 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.02□□□□□ -0.49
ZIC3O60481 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ZIC3O60481 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ZIC3O60481 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.02□□□□□ -0.49
ZIC3O60481 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ZIC3O60481 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 AC107918.4-201ENST00000641966 3141 ntBASIC12.02□□□□□ -0.49
ZIC3O60481 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZIC3O60481 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 DDC-206ENST00000431062 1620 ntTSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AC005252.3-201ENST00000623855 2258 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 HSD3BP1-201ENST00000286193 1111 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ZIC3O60481 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ZIC3O60481 MIR324-201ENST00000362183 83 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZIC3O60481 AC133141.1-201ENST00000443015 339 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 AC114781.1-201ENST00000450559 1028 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 AL451000.1-201ENST00000451300 1186 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 VTI1BP1-201ENST00000486325 700 ntBASIC12.01□□□□□ -0.49
ZIC3O60481 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
ZIC3O60481 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.01□□□□□ -0.49
ZIC3O60481 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.01□□□□□ -0.49
ZIC3O60481 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms