Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SNX29P1-201ENST00000548357 1007 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 MIR4326-201ENST00000582203 59 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC10.96□□□□□ -0.66
RAB40CQ96S21 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RAB40CQ96S21 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
RAB40CQ96S21 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
RAB40CQ96S21 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
RAB40CQ96S21 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
RAB40CQ96S21 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 BX284668.4-201ENST00000453917 508 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 HNRNPA1P48-202ENST00000565308 961 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 AC132825.4-202ENST00000578792 434 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 AC239800.4-201ENST00000603712 296 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 MIR6805-201ENST00000615055 62 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 AC067931.2-201ENST00000623655 2003 ntBASIC10.95□□□□□ -0.66
RAB40CQ96S21 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC10.95□□□□□ -0.66
RAB40CQ96S21 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RAB40CQ96S21 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms